DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSTEKEKDSVPTA
Uniprot ID:
O14974
Source protein:
Protein phosphatase 1 regulatory subunit 12A
Source gene:
PPP1R12A
Class:
DEG_COP1_1
Location:
617:629
E3 ligase:
COP1
DEGRON score:
0.9994
ASA_SCORE:
102.6769
COIL:
0.7701
CONS_SCORE:
0.3334
DSS_SCORE:
0.5491
HELIX:
0.2145
FCONS_SCORE:
0.9912
RIG_SCORE:
0.7222
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A629S
TCGA-62-A46P
LUAD
TCGA
DSTEKEKDSVPTA
DEG_COP1_1
0.7588
p.A629S
DO25767
LUAD
ICGC
DSTEKEKDSVPTA
DEG_COP1_1
0.7588
p.A629V
TCGA-AX-A2HD
UCEC
TCGA
DSTEKEKDSVPTA
DEG_COP1_1
0.5825
p.A629V
DO42608
UCEC
ICGC
DSTEKEKDSVPTA
DEG_COP1_1
0.5825
p.V626F
TCGA-BH-A0DK
BRCA
TCGA
DSTEKEKDSVPTA
DEG_COP1_1
0.7068
p.V626F
DO1305
BRCA
ICGC
DSTEKEKDSVPTA
DEG_COP1_1
0.7068
p.E616D
TCGA-D3-A2JN
SKCM
TCGA
DSTEKEKDSVPTA
DEG_COP1_1
0.3056
p.E616D
DO47590
SKCM
ICGC
DSTEKEKDSVPTA
DEG_COP1_1
0.3056
p.T609A
TCGA-DI-A1BU
UCEC
TCGA
DSTEKEKDSVPTA
DEG_COP1_1
0.5556
p.T609A
DO42023
UCEC
ICGC
DSTEKEKDSVPTA
DEG_COP1_1
0.5556
p.A615V
TCGA-DX-AB2Q
SARC
TCGA
DSTEKEKDSVPTA
DEG_COP1_1
0.2778
p.A615V
DO220087
SARC
ICGC
DSTEKEKDSVPTA
DEG_COP1_1
0.2778
p.R638T
DO6254
CESC
ICGC
DSTEKEKDSVPTA
DEG_COP1_1
0.0833
p.T631A
DO227802
COCA
ICGC
DSTEKEKDSVPTA
DEG_COP1_1
0.7222
p.T628K
DO229027
LICA
ICGC
DSTEKEKDSVPTA
DEG_COP1_1
0.7306
p.R612C
DO37074
READ
ICGC
DSTEKEKDSVPTA
DEG_COP1_1
0.1944
p.V626A
SIDM00845
Burkitt's Lymphoma
GDSC
DSTEKEKDSVPTA
DEG_COP1_1
0.6936
p.V626A
SIDM00461
Acute Myeloid Leukemia
GDSC
DSTEKEKDSVPTA
DEG_COP1_1
0.6936
p.V626A
SIDM01519
Head and Neck Carcinoma
GDSC
DSTEKEKDSVPTA
DEG_COP1_1
0.6936
p.V626A
ACH-000786
Lymphoma
CCLE
DSTEKEKDSVPTA
DEG_COP1_1
0.6936
p.V626A
ACH-000992
Head and Neck Cancer
CCLE
DSTEKEKDSVPTA
DEG_COP1_1
0.6936
p.V626A
Daudi
haematopoietic_and_lymphoid_tissue
COSMIC
DSTEKEKDSVPTA
DEG_COP1_1
0.6936
p.T628M
SIDM00746
Non-Small Cell Lung Carcinoma
GDSC
DSTEKEKDSVPTA
DEG_COP1_1
0.7423
p.T628M
SIDM00878
Breast Carcinoma
GDSC
DSTEKEKDSVPTA
DEG_COP1_1
0.7423
p.T628M
SIDM01101
Neuroblastoma
GDSC
DSTEKEKDSVPTA
DEG_COP1_1
0.7423
p.T619A
SIDM00333
Endometrial Carcinoma
GDSC
DSTEKEKDSVPTA
DEG_COP1_1
0.7139
p.T619A
ACH-000988
Endometrial/Uterine Cancer
CCLE
DSTEKEKDSVPTA
DEG_COP1_1
0.7139
p.T619A
MFE-319
endometrium
COSMIC
DSTEKEKDSVPTA
DEG_COP1_1
0.7139
p.L613S
SIDM01113
Other Sarcomas
GDSC
DSTEKEKDSVPTA
DEG_COP1_1
0.2222
p.L613S
ACH-000939
Sarcoma
CCLE
DSTEKEKDSVPTA
DEG_COP1_1
0.2222
p.L613S
SK-UT-1
soft_tissue
COSMIC
DSTEKEKDSVPTA
DEG_COP1_1
0.2222
p.T619N
SIDM00683
Prostate Carcinoma
GDSC
DSTEKEKDSVPTA
DEG_COP1_1
0.7055
p.T619N
ACH-000977
lymph_node
CCLE
DSTEKEKDSVPTA
DEG_COP1_1
0.7055
p.T619N
LNCaP-Clone-FGC
prostate
COSMIC
DSTEKEKDSVPTA
DEG_COP1_1
0.7055
p.R633T
D-423MG
central_nervous_system
COSMIC
DSTEKEKDSVPTA
DEG_COP1_1
0.2222
p.R628L
NCI-H2347
lung
COSMIC
DSTEKEKDSVPTA
DEG_COP1_1
0.8428
Drug responses associated with PPP1R12A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSTEKEKDSVPTA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14974
Protein phosphatase 1 regulatory subunit 12A
DEG_COP1_1
617:629
DSTEKEKDSVPTA
COP1
0.9994
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