DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DTYSVPSV
Uniprot ID:
P14543
Source protein:
Nidogen-1
Source gene:
NID1
Class:
DEG_COP1_1
Location:
324:331
E3 ligase:
COP1
DEGRON score:
0.9986
ASA_SCORE:
71.85
COIL:
0.786
CONS_SCORE:
0.2761
DSS_SCORE:
0.4739
HELIX:
0.0344
FCONS_SCORE:
1.0063
RIG_SCORE:
0.7234
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S333Y
TCGA-49-AAR9
LUAD
TCGA
DTYSVPSV
DEG_COP1_1
0.2778
p.S333Y
DO218921
LUAD
ICGC
DTYSVPSV
DEG_COP1_1
0.2778
p.T339N
TCGA-4B-A93V
LUAD
TCGA
DTYSVPSV
DEG_COP1_1
0.1111
p.T339N
DO218926
LUAD
ICGC
DTYSVPSV
DEG_COP1_1
0.1111
p.Y326H
TCGA-A5-A0G1
UCEC
TCGA
DTYSVPSV
DEG_COP1_1
0.7229
p.Y326H
DO42472
UCEC
ICGC
DTYSVPSV
DEG_COP1_1
0.7229
p.L318V
TCGA-AO-A0J6
BRCA
TCGA
DTYSVPSV
DEG_COP1_1
0.1667
p.L318V
DO4233
BRCA
ICGC
DTYSVPSV
DEG_COP1_1
0.1667
p.R336W
TCGA-D1-A177
UCEC
TCGA
DTYSVPSV
DEG_COP1_1
0.1944
p.R336W
TCGA-EO-A3B0
UCEC
TCGA
DTYSVPSV
DEG_COP1_1
0.1944
p.R336W
DO219773
UCEC
ICGC
DTYSVPSV
DEG_COP1_1
0.1944
p.R336W
DO42528
UCEC
ICGC
DTYSVPSV
DEG_COP1_1
0.1944
p.S330C
TCGA-DD-AACI
LIHC
TCGA
DTYSVPSV
DEG_COP1_1
0.7541
p.S330C
DO52205
LIHC
ICGC
DTYSVPSV
DEG_COP1_1
0.7541
p.R336Q
TCGA-DF-A2KU
UCEC
TCGA
DTYSVPSV
DEG_COP1_1
0.1944
p.R336Q
DO223286
UCEC
ICGC
DTYSVPSV
DEG_COP1_1
0.1944
p.T339A
TCGA-DI-A1BU
UCEC
TCGA
DTYSVPSV
DEG_COP1_1
0.1111
p.T339A
DO42023
UCEC
ICGC
DTYSVPSV
DEG_COP1_1
0.1111
p.K316R
DO234254
ESAD
ICGC
DTYSVPSV
DEG_COP1_1
0.2222
p.R319G
DO234304
ESAD
ICGC
DTYSVPSV
DEG_COP1_1
0.1944
p.K316T
DO233804
GACA
ICGC
DTYSVPSV
DEG_COP1_1
0.2222
p.P334T
DO229027
LICA
ICGC
DTYSVPSV
DEG_COP1_1
0.25
p.A317D
DO229031
LICA
ICGC
DTYSVPSV
DEG_COP1_1
0.1389
p.P334S
DO229177
LMS
ICGC
DTYSVPSV
DEG_COP1_1
0.25
p.R335C
DO228353
MALY
ICGC
DTYSVPSV
DEG_COP1_1
0.2222
p.R335C
SIDM00994
T-Lymphoblastic Leukemia
GDSC
DTYSVPSV
DEG_COP1_1
0.2222
p.R335C
ALL-SIL
haematopoietic_and_lymphoid_tissue
COSMIC
DTYSVPSV
DEG_COP1_1
0.2222
p.S314F
DO220891
MELA
ICGC
DTYSVPSV
DEG_COP1_1
0.0556
p.A337E
SIDM01116
Non-Small Cell Lung Carcinoma
GDSC
DTYSVPSV
DEG_COP1_1
0.1667
p.A337E
ACH-000789
Lung Cancer
CCLE
DTYSVPSV
DEG_COP1_1
0.1667
p.A337E
NCI-H810
lung
COSMIC
DTYSVPSV
DEG_COP1_1
0.1667
p.V331I
SIDM01146
Gastric Carcinoma
GDSC
DTYSVPSV
DEG_COP1_1
0.5965
p.V331I
NCI-SNU-1
stomach
COSMIC
DTYSVPSV
DEG_COP1_1
0.5965
Drug responses associated with NID1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DTYSVPSV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P14543
Nidogen-1
DEG_COP1_1
324:331
DTYSVPSV
COP1
0.9986
More...