DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DVVSSQGVPSI
Uniprot ID:
Q6PCD5
Source protein:
E3 ubiquitin-protein ligase RFWD3
Source gene:
RFWD3
Class:
DEG_COP1_1
Location:
42:52
E3 ligase:
COP1
DEGRON score:
0.9829
ASA_SCORE:
70.4364
COIL:
0.8224
CONS_SCORE:
0.3153
DSS_SCORE:
0.432
HELIX:
0.1066
FCONS_SCORE:
0.9484
RIG_SCORE:
0.6817
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E59K
TCGA-91-6830
LUAD
TCGA
DVVSSQGVPSI
DEG_COP1_1
0.1389
p.E59K
DO25867
LUAD
ICGC
DVVSSQGVPSI
DEG_COP1_1
0.1389
p.P57S
TCGA-A5-A0G1
UCEC
TCGA
DVVSSQGVPSI
DEG_COP1_1
0.1944
p.P57S
DO42472
UCEC
ICGC
DVVSSQGVPSI
DEG_COP1_1
0.1944
p.P50S
TCGA-EE-A2GR
SKCM
TCGA
DVVSSQGVPSI
DEG_COP1_1
0.6752
p.P50S
DO37996
SKCM
ICGC
DVVSSQGVPSI
DEG_COP1_1
0.6752
p.D42E
SIDM00014
Colorectal Carcinoma
GDSC
DVVSSQGVPSI
DEG_COP1_1
0.5647
p.V49L
ACH-001610
Brain Cancer
CCLE
DVVSSQGVPSI
DEG_COP1_1
0.6765
p.V39A
LIM1215
large_intestine
COSMIC
DVVSSQGVPSI
DEG_COP1_1
0.25
Drug responses associated with RFWD3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DVVSSQGVPSI
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6PCD5
E3 ubiquitin-protein ligase RFWD3
DEG_COP1_1
42:52
DVVSSQGVPSI
COP1
0.9829
More...