DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
EDFLVPEL
Uniprot ID:
Q9P2I0
Source protein:
Cleavage and polyadenylation specificity factor subunit 2
Source gene:
CPSF2
Class:
DEG_COP1_1
Location:
483:490
E3 ligase:
COP1
DEGRON score:
0.6504
ASA_SCORE:
80.175
COIL:
0.5234
CONS_SCORE:
0.3658
DSS_SCORE:
0.5025
HELIX:
0.402
FCONS_SCORE:
0.8464
RIG_SCORE:
0.8171
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K481N
TCGA-17-Z022
LUAD
TCGA
EDFLVPEL
DEG_COP1_1
0.7222
p.F485L
TCGA-AP-A1E0
UCEC
TCGA
EDFLVPEL
DEG_COP1_1
0.587
p.F485L
DO43154
UCEC
ICGC
EDFLVPEL
DEG_COP1_1
0.587
p.E478D
TCGA-B5-A1MR
UCEC
TCGA
EDFLVPEL
DEG_COP1_1
0.1944
p.E478D
DO41758
UCEC
ICGC
EDFLVPEL
DEG_COP1_1
0.1944
p.K499T
TCGA-CA-6718
COAD
TCGA
EDFLVPEL
DEG_COP1_1
0.5278
p.K499T
DO7801
COAD
ICGC
EDFLVPEL
DEG_COP1_1
0.5278
p.W473C
TCGA-DK-A2I2
BLCA
TCGA
EDFLVPEL
DEG_COP1_1
0.0556
p.W473C
DO708
BLCA
ICGC
EDFLVPEL
DEG_COP1_1
0.0556
p.E489D
SIDM00280
Gastric Carcinoma
GDSC
EDFLVPEL
DEG_COP1_1
0.5647
p.E489D
SIDM01559
Melanoma
GDSC
EDFLVPEL
DEG_COP1_1
0.5647
p.E489D
ECC10
stomach
COSMIC
EDFLVPEL
DEG_COP1_1
0.5647
Drug responses associated with CPSF2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of EDFLVPEL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9P2I0
Cleavage and polyadenylation specificity factor subunit 2
DEG_COP1_1
483:490
EDFLVPEL
COP1
0.6504
More...