DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
EDNLCVPDL
Uniprot ID:
P53708
Source protein:
Integrin alpha-8 [Cleaved into: Integrin alpha-8 heavy chain; Integrin alpha-8 light chain]
Source gene:
ITGA8
Class:
DEG_COP1_1
Location:
643:651
E3 ligase:
COP1
DEGRON score:
0.6027
ASA_SCORE:
54.3778
COIL:
0.5781
CONS_SCORE:
0.5971
DSS_SCORE:
0.1444
HELIX:
0.0951
FCONS_SCORE:
1.3421
RIG_SCORE:
0.847
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P649L
TCGA-16-0849
GBM
TCGA
EDNLCVPDL
DEG_COP1_1
0.7582
p.P649L
DO13917
GBM
ICGC
EDNLCVPDL
DEG_COP1_1
0.7582
p.P649S
TCGA-16-0849
GBM
TCGA
EDNLCVPDL
DEG_COP1_1
0.6752
p.P649S
TCGA-EE-A29E
SKCM
TCGA
EDNLCVPDL
DEG_COP1_1
0.6752
p.P649S
DO13917
GBM
ICGC
EDNLCVPDL
DEG_COP1_1
0.6752
p.P649S
DO37831
SKCM
ICGC
EDNLCVPDL
DEG_COP1_1
0.6752
p.V648F
TCGA-22-5472
LUSC
TCGA
EDNLCVPDL
DEG_COP1_1
0.7068
p.V648F
DO27421
LUSC
ICGC
EDNLCVPDL
DEG_COP1_1
0.7068
p.S654L
TCGA-36-2533
OV
TCGA
EDNLCVPDL
DEG_COP1_1
0.25
p.S654L
TCGA-P3-A6T3
HNSC
TCGA
EDNLCVPDL
DEG_COP1_1
0.25
p.S654L
DO49055
HNSC
ICGC
EDNLCVPDL
DEG_COP1_1
0.25
p.S654L
DO32516
OV
ICGC
EDNLCVPDL
DEG_COP1_1
0.25
p.D650Y
TCGA-95-7039
LUAD
TCGA
EDNLCVPDL
DEG_COP1_1
0.7325
p.D650Y
TCGA-AC-A23H
BRCA
TCGA
EDNLCVPDL
DEG_COP1_1
0.7325
p.D650Y
DO2401
BRCA
ICGC
EDNLCVPDL
DEG_COP1_1
0.7325
p.D650Y
DO23907
LUAD
ICGC
EDNLCVPDL
DEG_COP1_1
0.7325
p.P649T
TCGA-CR-7389
HNSC
TCGA
EDNLCVPDL
DEG_COP1_1
0.7031
p.P649T
DO14190
HNSC
ICGC
EDNLCVPDL
DEG_COP1_1
0.7031
p.P657Q
TCGA-D3-A2JP
SKCM
TCGA
EDNLCVPDL
DEG_COP1_1
0.1667
p.P657Q
DO47407
SKCM
ICGC
EDNLCVPDL
DEG_COP1_1
0.1667
p.Q661H
TCGA-FS-A1ZR
SKCM
TCGA
EDNLCVPDL
DEG_COP1_1
0.0556
p.Q661H
DO37651
SKCM
ICGC
EDNLCVPDL
DEG_COP1_1
0.0556
p.H636Q
DO228974
LICA
ICGC
EDNLCVPDL
DEG_COP1_1
0.1389
p.H636Q
DO231018
LUSC
ICGC
EDNLCVPDL
DEG_COP1_1
0.1389
p.L646M
DO229036
LICA
ICGC
EDNLCVPDL
DEG_COP1_1
0.5999
p.A655V
SIDM00373
Endometrial Carcinoma
GDSC
EDNLCVPDL
DEG_COP1_1
0.2222
p.A655V
ACH-000974
Endometrial/Uterine Cancer
CCLE
EDNLCVPDL
DEG_COP1_1
0.2222
p.N645K
SIDM00282
Colorectal Carcinoma
GDSC
EDNLCVPDL
DEG_COP1_1
0.5806
p.N645K
ACH-000998
Colon/Colorectal Cancer
CCLE
EDNLCVPDL
DEG_COP1_1
0.5806
p.N645K
CW-2
large_intestine
COSMIC
EDNLCVPDL
DEG_COP1_1
0.5806
p.V648A
SIDM00276
Biliary Tract Carcinoma
GDSC
EDNLCVPDL
DEG_COP1_1
0.6936
p.V648A
ACH-001858
Bile Duct Cancer
CCLE
EDNLCVPDL
DEG_COP1_1
0.6936
p.V648A
ACH-002237
Bile Duct Cancer
CCLE
EDNLCVPDL
DEG_COP1_1
0.6936
p.V648A
ETK-1
biliary_tract
COSMIC
EDNLCVPDL
DEG_COP1_1
0.6936
Drug responses associated with ITGA8 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of EDNLCVPDL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P53708
Integrin alpha-8 [Cleaved into: Integrin alpha-8 heavy chain; Integrin alpha-8 light chain]
DEG_COP1_1
643:651
EDNLCVPDL
COP1
0.6027
More...