DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
EDPSGAAVPEM
Uniprot ID:
Q8IVL1
Source protein:
Neuron navigator 2
Source gene:
NAV2
Class:
DEG_COP1_1
Location:
545:555
E3 ligase:
COP1
DEGRON score:
0.9468
ASA_SCORE:
89.4818
COIL:
0.9286
CONS_SCORE:
0.3187
DSS_SCORE:
0.6662
HELIX:
0.0334
FCONS_SCORE:
0.8901
RIG_SCORE:
0.6273
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S559F
TCGA-AL-3472
KIRP
TCGA
EDPSGAAVPEM
DEG_COP1_1
0.2222
p.S559F
SIDM01090
Colorectal Carcinoma
GDSC
EDPSGAAVPEM
DEG_COP1_1
0.2222
p.S559F
RKO
large_intestine
COSMIC
EDPSGAAVPEM
DEG_COP1_1
0.2222
p.K558Q
TCGA-B5-A0JY
UCEC
TCGA
EDPSGAAVPEM
DEG_COP1_1
0.3611
p.E554D
TCGA-B5-A3FA
UCEC
TCGA
EDPSGAAVPEM
DEG_COP1_1
0.5647
p.K561N
TCGA-BK-A6W3
UCEC
TCGA
EDPSGAAVPEM
DEG_COP1_1
0.2778
p.A558V
DO222440
ESCA
ICGC
EDPSGAAVPEM
DEG_COP1_1
0.3611
p.S536F
DO20923
KIRP
ICGC
EDPSGAAVPEM
DEG_COP1_1
0.0833
p.S536F
RKO
large_intestine
COSMIC
EDPSGAAVPEM
DEG_COP1_1
0.0833
p.K553N
DO36556
READ
ICGC
EDPSGAAVPEM
DEG_COP1_1
0.6918
p.P544S
DO47569
SKCM
ICGC
EDPSGAAVPEM
DEG_COP1_1
0.3056
p.P565L
DO47989
STAD
ICGC
EDPSGAAVPEM
DEG_COP1_1
0.0556
p.K538N
DO50076
UCEC
ICGC
EDPSGAAVPEM
DEG_COP1_1
0.1389
p.K535Q
DO43041
UCEC
ICGC
EDPSGAAVPEM
DEG_COP1_1
0.0556
p.S562C
DO41325
UCEC
ICGC
EDPSGAAVPEM
DEG_COP1_1
0.1389
p.S548N
SIDM00499
Prostate Carcinoma
GDSC
EDPSGAAVPEM
DEG_COP1_1
0.818
p.S548N
22RV1
prostate
COSMIC
EDPSGAAVPEM
DEG_COP1_1
0.818
p.A563S
SIDM00277
Acute Myeloid Leukemia
GDSC
EDPSGAAVPEM
DEG_COP1_1
0.1111
p.A563S
ACH-000198
Leukemia
CCLE
EDPSGAAVPEM
DEG_COP1_1
0.1111
p.A563S
EoL-1-cell
haematopoietic_and_lymphoid_tissue
COSMIC
EDPSGAAVPEM
DEG_COP1_1
0.1111
p.S550F
ACH-001550
Skin Cancer
CCLE
EDPSGAAVPEM
DEG_COP1_1
0.7982
p.S550F
MCC13
skin
COSMIC
EDPSGAAVPEM
DEG_COP1_1
0.7982
p.S562N
DU-145
prostate
COSMIC
EDPSGAAVPEM
DEG_COP1_1
0.1389
p.A540S
EoL-1-cell
haematopoietic_and_lymphoid_tissue
COSMIC
EDPSGAAVPEM
DEG_COP1_1
0.3056
Drug responses associated with NAV2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of EDPSGAAVPEM
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IVL1
Neuron navigator 2
DEG_COP1_1
545:555
EDPSGAAVPEM
COP1
0.9468
More...