DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
EEAEDKKKVPTP
Uniprot ID:
P12036
Source protein:
Neurofilament heavy polypeptide
Source gene:
NEFH
Class:
DEG_COP1_1
Location:
901:912
E3 ligase:
COP1
DEGRON score:
0.9899
ASA_SCORE:
111.8583
COIL:
0.818
CONS_SCORE:
0.7504
DSS_SCORE:
0.5822
HELIX:
0.1733
FCONS_SCORE:
1.008
RIG_SCORE:
0.6382
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P906Q
TCGA-05-4382
LUAD
TCGA
EEAEDKKKVPTP
DEG_COP1_1
0.7035
p.P906Q
DO24900
LUAD
ICGC
EEAEDKKKVPTP
DEG_COP1_1
0.7035
p.P911T
TCGA-32-4209
GBM
TCGA
EEAEDKKKVPTP
DEG_COP1_1
0.7031
p.P911T
DO13336
GBM
ICGC
EEAEDKKKVPTP
DEG_COP1_1
0.7031
p.A897D
TCGA-AA-3947
COAD
TCGA
EEAEDKKKVPTP
DEG_COP1_1
0.2222
p.A897D
DO8192
COAD
ICGC
EEAEDKKKVPTP
DEG_COP1_1
0.2222
p.V916A
TCGA-B5-A3FA
UCEC
TCGA
EEAEDKKKVPTP
DEG_COP1_1
0.2222
p.V916A
DO52402
UCEC
ICGC
EEAEDKKKVPTP
DEG_COP1_1
0.2222
p.E898K
TCGA-DS-A0VM
CESC
TCGA
EEAEDKKKVPTP
DEG_COP1_1
0.25
p.E898K
DO6258
CESC
ICGC
EEAEDKKKVPTP
DEG_COP1_1
0.25
p.P904S
DO230346
COCA
ICGC
EEAEDKKKVPTP
DEG_COP1_1
0.6752
p.E891D
DO228349
MALY
ICGC
EEAEDKKKVPTP
DEG_COP1_1
0.0556
p.E891D
SIDM00656
Burkitt's Lymphoma
GDSC
EEAEDKKKVPTP
DEG_COP1_1
0.0556
p.E891D
SIDM00641
Burkitt's Lymphoma
GDSC
EEAEDKKKVPTP
DEG_COP1_1
0.0556
p.E891D
ACH-000944
Lymphoma
CCLE
EEAEDKKKVPTP
DEG_COP1_1
0.0556
p.E891D
NAMALWA
haematopoietic_and_lymphoid_tissue
COSMIC
EEAEDKKKVPTP
DEG_COP1_1
0.0556
p.E895K
ACH-001521
Skin Cancer
CCLE
EEAEDKKKVPTP
DEG_COP1_1
0.6111
p.D919N
ACH-001567
Skin Cancer
CCLE
EEAEDKKKVPTP
DEG_COP1_1
0.25
Drug responses associated with NEFH mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of EEAEDKKKVPTP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P12036
Neurofilament heavy polypeptide
DEG_COP1_1
901:912
EEAEDKKKVPTP
COP1
0.9899
More...