DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
EEDTHPVVPDL
Uniprot ID:
Q9Y5F7
Source protein:
Protocadherin gamma-C4
Source gene:
PCDHGC4
Class:
DEG_COP1_1
Location:
666:676
E3 ligase:
COP1
DEGRON score:
0.5546
ASA_SCORE:
70.5818
COIL:
0.7724
CONS_SCORE:
0.637
DSS_SCORE:
0.4655
HELIX:
0.046
FCONS_SCORE:
1.1855
RIG_SCORE:
0.751
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D675Y
TCGA-AX-A2HC
UCEC
TCGA
EEDTHPVVPDL
DEG_COP1_1
0.7325
p.D675Y
DO41572
UCEC
ICGC
EEDTHPVVPDL
DEG_COP1_1
0.7325
p.D675A
TCGA-F5-6814
READ
TCGA
EEDTHPVVPDL
DEG_COP1_1
0.7793
p.D675A
DO36556
READ
ICGC
EEDTHPVVPDL
DEG_COP1_1
0.7793
p.V673A
TCGA-FU-A3HZ
CESC
TCGA
EEDTHPVVPDL
DEG_COP1_1
0.6936
p.V673A
DO6308
CESC
ICGC
EEDTHPVVPDL
DEG_COP1_1
0.6936
p.L661P
TCGA-XF-A9T6
BLCA
TCGA
EEDTHPVVPDL
DEG_COP1_1
0.1944
p.L661P
DO51926
BLCA
ICGC
EEDTHPVVPDL
DEG_COP1_1
0.1944
p.S664F
TCGA-YD-A9TA
SKCM
TCGA
EEDTHPVVPDL
DEG_COP1_1
0.2778
p.S664F
DO219503
SKCM
ICGC
EEDTHPVVPDL
DEG_COP1_1
0.2778
p.V659F
DO228976
LICA
ICGC
EEDTHPVVPDL
DEG_COP1_1
0.1389
p.S680L
SIDM00080
Melanoma
GDSC
EEDTHPVVPDL
DEG_COP1_1
0.2222
p.S680L
ACH-000730
Skin Cancer
CCLE
EEDTHPVVPDL
DEG_COP1_1
0.2222
p.S680L
SK-MEL-5
skin
COSMIC
EEDTHPVVPDL
DEG_COP1_1
0.2222
p.L676I
SIDM01018
Hodgkin's Lymphoma
GDSC
EEDTHPVVPDL
DEG_COP1_1
0.6063
p.L676I
ACH-000815
Lymphoma
CCLE
EEDTHPVVPDL
DEG_COP1_1
0.6063
p.L676I
KM-H2
haematopoietic_and_lymphoid_tissue
COSMIC
EEDTHPVVPDL
DEG_COP1_1
0.6063
Drug responses associated with PCDHGC4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of EEDTHPVVPDL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y5F7
Protocadherin gamma-C4
DEG_COP1_1
666:676
EEDTHPVVPDL
COP1
0.5546
More...