DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
EEESPAKVPEL
Uniprot ID:
Q5JVS0
Source protein:
Intracellular hyaluronan-binding protein 4
Source gene:
HABP4
Class:
DEG_COP1_1
Location:
270:280
E3 ligase:
COP1
DEGRON score:
0.8039
ASA_SCORE:
100.4182
COIL:
0.8177
CONS_SCORE:
0.549
DSS_SCORE:
0.8038
HELIX:
0.1637
FCONS_SCORE:
0.9277
RIG_SCORE:
0.6457
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S265Y
TCGA-FS-A1ZJ
SKCM
TCGA
EEESPAKVPEL
DEG_COP1_1
0.1944
p.S265Y
DO37956
SKCM
ICGC
EEESPAKVPEL
DEG_COP1_1
0.1944
p.R264H
DO683
BLCA
ICGC
EEESPAKVPEL
DEG_COP1_1
0.1667
p.G272E
DO49950
CESC
ICGC
EEESPAKVPEL
DEG_COP1_1
0.7199
p.G272E
NCI-H510A
lung
COSMIC
EEESPAKVPEL
DEG_COP1_1
0.7199
p.E264D
DO229051
LICA
ICGC
EEESPAKVPEL
DEG_COP1_1
0.1667
p.P260H
LNCaP-Clone-FGC
prostate
COSMIC
EEESPAKVPEL
DEG_COP1_1
0.0556
p.R261C
HCC2998
large_intestine
COSMIC
EEESPAKVPEL
DEG_COP1_1
0.0833
p.R274W
OSC-20
upper_aerodigestive_tract
COSMIC
EEESPAKVPEL
DEG_COP1_1
0.8634
p.R274W
NOS-1
bone
COSMIC
EEESPAKVPEL
DEG_COP1_1
0.8634
p.R271Q
SUP-T1
haematopoietic_and_lymphoid_tissue
COSMIC
EEESPAKVPEL
DEG_COP1_1
0.7329
Drug responses associated with HABP4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of EEESPAKVPEL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5JVS0
Intracellular hyaluronan-binding protein 4
DEG_COP1_1
270:280
EEESPAKVPEL
COP1
0.8039
More...