DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
EEPPVPEA
Uniprot ID:
Q9H3S7
Source protein:
Tyrosine-protein phosphatase non-receptor type 23
Source gene:
PTPN23
Class:
DEG_COP1_1
Location:
1560:1567
E3 ligase:
COP1
DEGRON score:
0.9739
ASA_SCORE:
102.625
COIL:
0.9679
CONS_SCORE:
0.2611
DSS_SCORE:
0.8506
HELIX:
0.0149
FCONS_SCORE:
0.9461
RIG_SCORE:
0.5172
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L1577M
TCGA-CV-6953
HNSC
TCGA
EEPPVPEA
DEG_COP1_1
0.0556
p.L1577M
DO14278
HNSC
ICGC
EEPPVPEA
DEG_COP1_1
0.0556
p.A1567V
TCGA-D1-A15X
UCEC
TCGA
EEPPVPEA
DEG_COP1_1
0.5825
p.A1567V
DO43274
UCEC
ICGC
EEPPVPEA
DEG_COP1_1
0.5825
p.L1552P
DO50741
LICA
ICGC
EEPPVPEA
DEG_COP1_1
0.1111
p.S1569R
DO228355
MALY
ICGC
EEPPVPEA
DEG_COP1_1
0.2778
p.P1558L
DO222557
MELA
ICGC
EEPPVPEA
DEG_COP1_1
0.2778
Drug responses associated with PTPN23 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of EEPPVPEA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9H3S7
Tyrosine-protein phosphatase non-receptor type 23
DEG_COP1_1
1560:1567
EEPPVPEA
COP1
0.9739
More...