DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
EEPSSSSVPSA
Uniprot ID:
Q6ZRS2
Source protein:
Helicase SRCAP
Source gene:
SRCAP
Class:
DEG_COP1_1
Location:
2215:2225
E3 ligase:
COP1
DEGRON score:
0.9626
ASA_SCORE:
81.5091
COIL:
0.9314
CONS_SCORE:
0.3258
DSS_SCORE:
0.7242
HELIX:
0.0467
FCONS_SCORE:
0.7679
RIG_SCORE:
0.5889
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E2227K
TCGA-CV-7242
HNSC
TCGA
EEPSSSSVPSA
DEG_COP1_1
0.2778
p.E2227K
TCGA-XF-AAMZ
BLCA
TCGA
EEPSSSSVPSA
DEG_COP1_1
0.2778
p.E2227K
DO219051
BLCA
ICGC
EEPSSSSVPSA
DEG_COP1_1
0.2778
p.E2227K
DO14974
HNSC
ICGC
EEPSSSSVPSA
DEG_COP1_1
0.2778
p.S2220L
TCGA-EE-A2MR
SKCM
TCGA
EEPSSSSVPSA
DEG_COP1_1
0.6556
p.A2234S
TCGA-IB-7651
PAAD
TCGA
EEPSSSSVPSA
DEG_COP1_1
0.0833
p.D2211H
TCGA-VS-A9UZ
CESC
TCGA
EEPSSSSVPSA
DEG_COP1_1
0.2222
p.A2223S
DO229019
LICA
ICGC
EEPSSSSVPSA
DEG_COP1_1
0.7588
p.E2208D
DO229035
LICA
ICGC
EEPSSSSVPSA
DEG_COP1_1
0.1389
p.R2235W
DO26250
LUAD
ICGC
EEPSSSSVPSA
DEG_COP1_1
0.0556
p.T2205A
SIDM02026
Colorectal Carcinoma
GDSC
EEPSSSSVPSA
DEG_COP1_1
0.0556
p.E2230V
SIDM01261
Breast Carcinoma
GDSC
EEPSSSSVPSA
DEG_COP1_1
0.1944
p.E2230V
YMB-1-E
breast
COSMIC
EEPSSSSVPSA
DEG_COP1_1
0.1944
p.P2226L
ACH-001063
Ovarian Cancer
CCLE
EEPSSSSVPSA
DEG_COP1_1
0.3056
p.P2226S
Mewo
skin
COSMIC
EEPSSSSVPSA
DEG_COP1_1
0.3056
p.P2228A
CHP-134
autonomic_ganglia
COSMIC
EEPSSSSVPSA
DEG_COP1_1
0.25
Drug responses associated with SRCAP mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of EEPSSSSVPSA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6ZRS2
Helicase SRCAP
DEG_COP1_1
2215:2225
EEPSSSSVPSA
COP1
0.9626
More...