DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
EGSSSYEVPSV
Uniprot ID:
Q9C0I9
Source protein:
Leucine-rich repeat-containing protein 27
Source gene:
LRRC27
Class:
DEG_COP1_1
Location:
2:12
E3 ligase:
COP1
DEGRON score:
0.9522
ASA_SCORE:
79.3
COIL:
0.7756
CONS_SCORE:
0.515
DSS_SCORE:
0.7205
HELIX:
0.0592
FCONS_SCORE:
1.0077
RIG_SCORE:
0.6679
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S11F
TCGA-B5-A1MR
UCEC
TCGA
EGSSSYEVPSV
DEG_COP1_1
0.7982
p.S11F
DO41758
UCEC
ICGC
EGSSSYEVPSV
DEG_COP1_1
0.7982
p.N8I
DO222404
BTCA
ICGC
EGSSSYEVPSV
DEG_COP1_1
0.728
p.P10S
DO229453
SKCA
ICGC
EGSSSYEVPSV
DEG_COP1_1
0.6752
p.A14V
TCGA-BG-A222
UCEC
TCGA
EGSSSYEVPSV
DEG_COP1_1
0.2778
p.A14V
DO42977
UCEC
ICGC
EGSSSYEVPSV
DEG_COP1_1
0.2778
p.A15D
TCGA-13-2060
OV
TCGA
EGSSSYEVPSV
DEG_COP1_1
0.25
p.A15D
DO30170
OV
ICGC
EGSSSYEVPSV
DEG_COP1_1
0.25
p.G22C
TCGA-BF-A1Q0
SKCM
TCGA
EGSSSYEVPSV
DEG_COP1_1
0.0556
p.G22C
DO47374
SKCM
ICGC
EGSSSYEVPSV
DEG_COP1_1
0.0556
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Drug responses associated with LRRC27 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
No data available in table
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All proteins holding degron of EGSSSYEVPSV
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9C0I9
Leucine-rich repeat-containing protein 27
DEG_COP1_1
2:12
EGSSSYEVPSV
COP1
0.9522
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