DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
EGSSSYEVPSV
Uniprot ID:
Q9C0I9
Source protein:
Leucine-rich repeat-containing protein 27
Source gene:
LRRC27
Class:
DEG_COP1_1
Location:
2:12
E3 ligase:
COP1
DEGRON score:
0.9522
ASA_SCORE:
79.3
COIL:
0.7756
CONS_SCORE:
0.515
DSS_SCORE:
0.7205
HELIX:
0.0592
FCONS_SCORE:
1.0077
RIG_SCORE:
0.6679
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A15D
TCGA-13-2060
OV
TCGA
EGSSSYEVPSV
DEG_COP1_1
0.25
p.A15D
DO30170
OV
ICGC
EGSSSYEVPSV
DEG_COP1_1
0.25
p.S11F
TCGA-B5-A1MR
UCEC
TCGA
EGSSSYEVPSV
DEG_COP1_1
0.7982
p.S11F
DO41758
UCEC
ICGC
EGSSSYEVPSV
DEG_COP1_1
0.7982
p.G22C
TCGA-BF-A1Q0
SKCM
TCGA
EGSSSYEVPSV
DEG_COP1_1
0.0556
p.G22C
DO47374
SKCM
ICGC
EGSSSYEVPSV
DEG_COP1_1
0.0556
p.A14V
TCGA-BG-A222
UCEC
TCGA
EGSSSYEVPSV
DEG_COP1_1
0.2778
p.A14V
DO42977
UCEC
ICGC
EGSSSYEVPSV
DEG_COP1_1
0.2778
p.N8I
DO222404
BTCA
ICGC
EGSSSYEVPSV
DEG_COP1_1
0.728
p.P10S
DO229453
SKCA
ICGC
EGSSSYEVPSV
DEG_COP1_1
0.6752
Drug responses associated with LRRC27 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of EGSSSYEVPSV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9C0I9
Leucine-rich repeat-containing protein 27
DEG_COP1_1
2:12
EGSSSYEVPSV
COP1
0.9522
More...