DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
EHSDAVPDA
Uniprot ID:
Q68D85
Source protein:
Natural cytotoxicity triggering receptor 3 ligand 1
Source gene:
NCR3LG1
Class:
DEG_COP1_1
Location:
412:420
E3 ligase:
COP1
DEGRON score:
0.9433
ASA_SCORE:
91.8667
COIL:
0.92
CONS_SCORE:
0.2948
DSS_SCORE:
0.692
HELIX:
0.0621
FCONS_SCORE:
0.8406
RIG_SCORE:
0.6545
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K404T
TCGA-BK-A6W3
UCEC
TCGA
EHSDAVPDA
DEG_COP1_1
0.2222
p.K404T
DO50076
UCEC
ICGC
EHSDAVPDA
DEG_COP1_1
0.2222
p.P418L
TCGA-C8-A8HQ
BRCA
TCGA
EHSDAVPDA
DEG_COP1_1
0.7582
p.P418L
TCGA-FI-A2D0
UCEC
TCGA
EHSDAVPDA
DEG_COP1_1
0.7582
p.P418L
DO219623
BRCA
ICGC
EHSDAVPDA
DEG_COP1_1
0.7582
p.P418L
DO43891
UCEC
ICGC
EHSDAVPDA
DEG_COP1_1
0.7582
p.RE411RK
DO222632
MELA
ICGC
EHSDAVPDA
DEG_COP1_1
0
p.I422V
SIDM00878
Breast Carcinoma
GDSC
EHSDAVPDA
DEG_COP1_1
0.2778
p.I422V
ACH-000930
Breast Cancer
CCLE
EHSDAVPDA
DEG_COP1_1
0.2778
p.I422V
HCC1569
breast
COSMIC
EHSDAVPDA
DEG_COP1_1
0.2778
p.S414L
SIDM00703
Non-Small Cell Lung Carcinoma
GDSC
EHSDAVPDA
DEG_COP1_1
0.7667
p.P410H
SIDM00946
T-Lymphoblastic Leukemia
GDSC
EHSDAVPDA
DEG_COP1_1
0.2778
p.P410H
ACH-000981
Leukemia
CCLE
EHSDAVPDA
DEG_COP1_1
0.2778
p.P410H
DND-41
haematopoietic_and_lymphoid_tissue
COSMIC
EHSDAVPDA
DEG_COP1_1
0.2778
Drug responses associated with NCR3LG1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of EHSDAVPDA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q68D85
Natural cytotoxicity triggering receptor 3 ligand 1
DEG_COP1_1
412:420
EHSDAVPDA
COP1
0.9433
More...