DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
ENEDPLVPDV
Uniprot ID:
P55290
Source protein:
Cadherin-13
Source gene:
CDH13
Class:
DEG_COP1_1
Location:
445:454
E3 ligase:
COP1
DEGRON score:
0.9137
ASA_SCORE:
67.47
COIL:
0.7565
CONS_SCORE:
0.5403
DSS_SCORE:
0.3122
HELIX:
0.0247
FCONS_SCORE:
0.8938
RIG_SCORE:
0.7956
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G452R
TCGA-19-5959
GBM
TCGA
ENEDPLVPDV
DEG_COP1_1
0.7568
p.G452E
TCGA-3N-A9WD
SKCM
TCGA
ENEDPLVPDV
DEG_COP1_1
0.7199
p.T462P
TCGA-56-8504
LUSC
TCGA
ENEDPLVPDV
DEG_COP1_1
0.1111
p.T462A
TCGA-AX-A1CE
UCEC
TCGA
ENEDPLVPDV
DEG_COP1_1
0.1111
p.D436N
TCGA-EE-A2GI
SKCM
TCGA
ENEDPLVPDV
DEG_COP1_1
0.0833
p.G455R
TCGA-GN-A266
SKCM
TCGA
ENEDPLVPDV
DEG_COP1_1
0.3056
p.S435Y
DO44041
BLCA
ICGC
ENEDPLVPDV
DEG_COP1_1
0.0556
p.V464I
DO482
BLCA
ICGC
ENEDPLVPDV
DEG_COP1_1
0.0556
p.V464I
DO34312
PACA
ICGC
ENEDPLVPDV
DEG_COP1_1
0.0556
p.V464I
DO37291
READ
ICGC
ENEDPLVPDV
DEG_COP1_1
0.0556
p.G457S
DO3305
BRCA
ICGC
ENEDPLVPDV
DEG_COP1_1
0.25
p.G457S
DO48020
STAD
ICGC
ENEDPLVPDV
DEG_COP1_1
0.25
p.G457S
Calu-3
lung
COSMIC
ENEDPLVPDV
DEG_COP1_1
0.25
p.P449S
DO219735
CESC
ICGC
ENEDPLVPDV
DEG_COP1_1
0.5641
p.P449S
DO42977
UCEC
ICGC
ENEDPLVPDV
DEG_COP1_1
0.5641
p.V464G
DO228288
LICA
ICGC
ENEDPLVPDV
DEG_COP1_1
0.0556
p.V451L
DO228948
LICA
ICGC
ENEDPLVPDV
DEG_COP1_1
0.6765
p.G457C
DO24800
LUAD
ICGC
ENEDPLVPDV
DEG_COP1_1
0.25
p.S435F
DO222875
MELA
ICGC
ENEDPLVPDV
DEG_COP1_1
0.0556
p.S435F
DO219482
SKCM
ICGC
ENEDPLVPDV
DEG_COP1_1
0.0556
p.E445K
DO37444
SKCM
ICGC
ENEDPLVPDV
DEG_COP1_1
0.7022
p.E447K
DO50291
SKCM
ICGC
ENEDPLVPDV
DEG_COP1_1
0.591
p.E447K
DO51301
SKCM
ICGC
ENEDPLVPDV
DEG_COP1_1
0.591
p.H438Y
DO51274
SKCM
ICGC
ENEDPLVPDV
DEG_COP1_1
0.1389
p.D448G
DO43041
UCEC
ICGC
ENEDPLVPDV
DEG_COP1_1
0.6087
p.K443R
DO41578
UCEC
ICGC
ENEDPLVPDV
DEG_COP1_1
0.2778
p.N463K
SIDM01203
Other Solid Cancers
GDSC
ENEDPLVPDV
DEG_COP1_1
0.0833
p.N463K
ACH-002291
Embryonal Cancer
CCLE
ENEDPLVPDV
DEG_COP1_1
0.0833
p.N463K
NTERA-2_cl_D1
testis
COSMIC
ENEDPLVPDV
DEG_COP1_1
0.0833
p.H461Y
SIDM00007
Other Solid Cancers
GDSC
ENEDPLVPDV
DEG_COP1_1
0.1389
p.H461Y
ACH-001550
Skin Cancer
CCLE
ENEDPLVPDV
DEG_COP1_1
0.1389
p.H461Y
MCC13
skin
COSMIC
ENEDPLVPDV
DEG_COP1_1
0.1389
p.G441C
SIDM01617
Endometrial Carcinoma
GDSC
ENEDPLVPDV
DEG_COP1_1
0.2222
p.G441C
ACH-000994
Endometrial/Uterine Cancer
CCLE
ENEDPLVPDV
DEG_COP1_1
0.2222
p.V454I
WM1552C
skin
COSMIC
ENEDPLVPDV
DEG_COP1_1
0.5965
p.G435D
SNU-1040
large_intestine
COSMIC
ENEDPLVPDV
DEG_COP1_1
0.0556
Drug responses associated with CDH13 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ENEDPLVPDV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P55290
Cadherin-13
DEG_COP1_1
445:454
ENEDPLVPDV
COP1
0.9137
More...