DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
EPEETPIK
Uniprot ID:
Q9UHK0
Source protein:
Nuclear fragile X mental retardation-interacting protein 1
Source gene:
NUFIP1
Class:
DEG_SCF_SKP2-CKS1_1
Location:
377:384
E3 ligase:
SKP2,CSK1
DEGRON score:
0.5796
ASA_SCORE:
110.8625
COIL:
0.9084
CONS_SCORE:
0.3833
DSS_SCORE:
0.6719
HELIX:
0.0605
FCONS_SCORE:
0.9005
RIG_SCORE:
0.6581
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G369D
TCGA-63-A5MM
LUSC
TCGA
EPEETPIK
DEG_SCF_SKP2-CKS1_1
0.1111
p.G369D
DO219153
LUSC
ICGC
EPEETPIK
DEG_SCF_SKP2-CKS1_1
0.1111
p.V389I
TCGA-75-6214
LUAD
TCGA
EPEETPIK
DEG_SCF_SKP2-CKS1_1
0.1944
p.V389I
DO24830
LUAD
ICGC
EPEETPIK
DEG_SCF_SKP2-CKS1_1
0.1944
p.S367I
TCGA-77-8128
LUSC
TCGA
EPEETPIK
DEG_SCF_SKP2-CKS1_1
0.0556
p.S367I
DO26464
LUSC
ICGC
EPEETPIK
DEG_SCF_SKP2-CKS1_1
0.0556
p.E379Q
TCGA-ZF-A9R0
BLCA
TCGA
EPEETPIK
DEG_SCF_SKP2-CKS1_1
0.6744
p.E379Q
DO219055
BLCA
ICGC
EPEETPIK
DEG_SCF_SKP2-CKS1_1
0.6744
p.E386G
DO222487
ESCA
ICGC
EPEETPIK
DEG_SCF_SKP2-CKS1_1
0.2778
p.P382H
DO233766
GACA
ICGC
EPEETPIK
DEG_SCF_SKP2-CKS1_1
0.7694
p.P378T
DO228952
LICA
ICGC
EPEETPIK
DEG_SCF_SKP2-CKS1_1
0.5919
p.E375V
DO23186
LINC
ICGC
EPEETPIK
DEG_SCF_SKP2-CKS1_1
0.2778
Drug responses associated with NUFIP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of EPEETPIK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UHK0
Nuclear fragile X mental retardation-interacting protein 1
DEG_SCF_SKP2-CKS1_1
377:384
EPEETPIK
SKP2,CSK1
0.5796
More...