DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
EPPDLPVPEL
Uniprot ID:
P18887
Source protein:
DNA repair protein XRCC1
Source gene:
XRCC1
Class:
DEG_COP1_1
Location:
530:539
E3 ligase:
COP1
DEGRON score:
0.8922
ASA_SCORE:
83.97
COIL:
0.9276
CONS_SCORE:
0.4195
DSS_SCORE:
0.7926
HELIX:
0.0353
FCONS_SCORE:
0.9499
RIG_SCORE:
0.6686
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L534M
TCGA-A5-A0G2
UCEC
TCGA
EPPDLPVPEL
DEG_COP1_1
0.5999
p.L534M
DO41235
UCEC
ICGC
EPPDLPVPEL
DEG_COP1_1
0.5999
p.F542L
TCGA-AX-A0J0
UCEC
TCGA
EPPDLPVPEL
DEG_COP1_1
0.25
p.F542L
DO41133
UCEC
ICGC
EPPDLPVPEL
DEG_COP1_1
0.25
p.T523M
TCGA-AX-A3G8
UCEC
TCGA
EPPDLPVPEL
DEG_COP1_1
0.5833
p.T523M
DO41014
UCEC
ICGC
EPPDLPVPEL
DEG_COP1_1
0.5833
p.Q544R
TCGA-AZ-4615
COAD
TCGA
EPPDLPVPEL
DEG_COP1_1
0.1944
p.Q544R
DO7977
COAD
ICGC
EPPDLPVPEL
DEG_COP1_1
0.1944
p.D541Y
TCGA-D3-A2JP
SKCM
TCGA
EPPDLPVPEL
DEG_COP1_1
0.2778
p.D541Y
DO47407
SKCM
ICGC
EPPDLPVPEL
DEG_COP1_1
0.2778
p.Q544K
TCGA-GN-A265
SKCM
TCGA
EPPDLPVPEL
DEG_COP1_1
0.1944
p.Q544K
DO37491
SKCM
ICGC
EPPDLPVPEL
DEG_COP1_1
0.1944
p.H547Y
DO230343
COCA
ICGC
EPPDLPVPEL
DEG_COP1_1
0.1111
p.P532L
DO220907
MELA
ICGC
EPPDLPVPEL
DEG_COP1_1
0.6471
p.D533G
SIDM00534
Colorectal Carcinoma
GDSC
EPPDLPVPEL
DEG_COP1_1
0.7198
p.D533G
ACH-000986
Colon/Colorectal Cancer
CCLE
EPPDLPVPEL
DEG_COP1_1
0.7198
p.D533G
ACH-001664
Gastric Cancer
CCLE
EPPDLPVPEL
DEG_COP1_1
0.7198
p.D533G
HT-115
large_intestine
COSMIC
EPPDLPVPEL
DEG_COP1_1
0.7198
p.D526E
HMV-II
skin
COSMIC
EPPDLPVPEL
DEG_COP1_1
0.2222
p.R549Q
SNU-1040
large_intestine
COSMIC
EPPDLPVPEL
DEG_COP1_1
0.0556
Drug responses associated with XRCC1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of EPPDLPVPEL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P18887
DNA repair protein XRCC1
DEG_COP1_1
530:539
EPPDLPVPEL
COP1
0.8922
More...