DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
EPTASVPPE
Uniprot ID:
Q53GG5
Source protein:
PDZ and LIM domain protein 3
Source gene:
PDLIM3
Class:
DEG_SIAH_1
Location:
222:230
E3 ligase:
SIAH1,SIAH2,SIAH3
DEGRON score:
0.9892
ASA_SCORE:
76.7778
COIL:
0.9041
CONS_SCORE:
0.3683
DSS_SCORE:
0.6354
HELIX:
0.056
FCONS_SCORE:
0.8008
RIG_SCORE:
0.6323
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D239N
TCGA-AA-A02E
COAD
TCGA
EPTASVPPE
DEG_SIAH_1
0.0833
p.S226L
TCGA-AZ-4315
COAD
TCGA
EPTASVPPE
DEG_SIAH_1
0.6556
p.S226L
TCGA-VR-A8EO
ESCA
TCGA
EPTASVPPE
DEG_SIAH_1
0.6556
p.S226L
DO8842
COAD
ICGC
EPTASVPPE
DEG_SIAH_1
0.6556
p.S226L
DO218068
GACA
ICGC
EPTASVPPE
DEG_SIAH_1
0.6556
p.S226L
DO233779
GACA
ICGC
EPTASVPPE
DEG_SIAH_1
0.6556
p.H238D
TCGA-CV-A45Z
HNSC
TCGA
EPTASVPPE
DEG_SIAH_1
0.1111
p.H238D
DO52064
HNSC
ICGC
EPTASVPPE
DEG_SIAH_1
0.1111
p.E230K
DO229389
BTCA
ICGC
EPTASVPPE
DEG_SIAH_1
0.591
p.E230K
SIDM00193
Colorectal Carcinoma
GDSC
EPTASVPPE
DEG_SIAH_1
0.591
p.E230K
SIDM01031
Esophageal Squamous Cell Carcinoma
GDSC
EPTASVPPE
DEG_SIAH_1
0.591
p.E230K
SNU-81
large_intestine
COSMIC
EPTASVPPE
DEG_SIAH_1
0.591
p.E230K
KYSE-150
oesophagus
COSMIC
EPTASVPPE
DEG_SIAH_1
0.591
p.A213T
DO233882
GACA
ICGC
EPTASVPPE
DEG_SIAH_1
0.0833
p.G235D
DO46657
PAAD
ICGC
EPTASVPPE
DEG_SIAH_1
0.1944
p.T231M
DO33091
PACA
ICGC
EPTASVPPE
DEG_SIAH_1
0.3056
p.A240G
DO218888
SKCA
ICGC
EPTASVPPE
DEG_SIAH_1
0.0556
p.L237F
SIDM00447
B-Lymphoblastic Leukemia
GDSC
EPTASVPPE
DEG_SIAH_1
0.1389
p.L237F
REH
haematopoietic_and_lymphoid_tissue
COSMIC
EPTASVPPE
DEG_SIAH_1
0.1389
p.N240S
SIDM00799
Glioblastoma
GDSC
EPTASVPPE
DEG_SIAH_1
0.0556
p.N240S
A172
central_nervous_system
COSMIC
EPTASVPPE
DEG_SIAH_1
0.0556
p.P228L
SIDM00751
Non-Small Cell Lung Carcinoma
GDSC
EPTASVPPE
DEG_SIAH_1
0.6471
p.P228L
NCI-H1563
lung
COSMIC
EPTASVPPE
DEG_SIAH_1
0.6471
Drug responses associated with PDLIM3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of EPTASVPPE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q53GG5
PDZ and LIM domain protein 3
DEG_SIAH_1
222:230
EPTASVPPE
SIAH1,SIAH2,SIAH3
0.9892
More...