DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
ERAVLTCLI
Uniprot ID:
Q96RW7
Source protein:
Hemicentin-1
Source gene:
HMCN1
Class:
DEG_APCC_DBOX_1
Location:
535:543
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5326
ASA_SCORE:
46.7667
COIL:
0.2292
CONS_SCORE:
0.3759
DSS_SCORE:
0.1014
HELIX:
0.0013
FCONS_SCORE:
0.9256
RIG_SCORE:
0.941
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A546V
TCGA-2W-A8YY
CESC
TCGA
ERAVLTCLI
DEG_APCC_DBOX_1
0.25
p.A546V
DO223732
CESC
ICGC
ERAVLTCLI
DEG_APCC_DBOX_1
0.25
p.V547A
TCGA-D1-A167
UCEC
TCGA
ERAVLTCLI
DEG_APCC_DBOX_1
0.2222
p.V547A
DO40978
UCEC
ICGC
ERAVLTCLI
DEG_APCC_DBOX_1
0.2222
p.I543M
TCGA-DK-AA6U
BLCA
TCGA
ERAVLTCLI
DEG_APCC_DBOX_1
0.6507
p.I543M
DO219008
BLCA
ICGC
ERAVLTCLI
DEG_APCC_DBOX_1
0.6507
p.V547M
TCGA-EE-A181
SKCM
TCGA
ERAVLTCLI
DEG_APCC_DBOX_1
0.2222
p.V547M
DO37444
SKCM
ICGC
ERAVLTCLI
DEG_APCC_DBOX_1
0.2222
p.A537T
DO233944
GACA
ICGC
ERAVLTCLI
DEG_APCC_DBOX_1
0.6028
p.A546E
DO228841
LICA
ICGC
ERAVLTCLI
DEG_APCC_DBOX_1
0.25
p.V538I
DO33288
PACA
ICGC
ERAVLTCLI
DEG_APCC_DBOX_1
0.5965
p.V529F
SIDM00113
Kidney Carcinoma
GDSC
ERAVLTCLI
DEG_APCC_DBOX_1
0.1667
p.V529F
TK10
kidney
COSMIC
ERAVLTCLI
DEG_APCC_DBOX_1
0.1667
p.V525E
SIDM00296
Small Cell Lung Carcinoma
GDSC
ERAVLTCLI
DEG_APCC_DBOX_1
0.0556
p.V525E
ACH-002051
Lung Cancer
CCLE
ERAVLTCLI
DEG_APCC_DBOX_1
0.0556
p.V525E
LU-134-A
lung
COSMIC
ERAVLTCLI
DEG_APCC_DBOX_1
0.0556
p.G534V
SIDM01605
Non-Small Cell Lung Carcinoma
GDSC
ERAVLTCLI
DEG_APCC_DBOX_1
0.3056
p.G534V
ACH-000891
Lung Cancer
CCLE
ERAVLTCLI
DEG_APCC_DBOX_1
0.3056
Drug responses associated with HMCN1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ERAVLTCLI
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96RW7
Hemicentin-1
DEG_APCC_DBOX_1
535:543
ERAVLTCLI
APC,CDC20,FZR1
0.5326
More...