DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
ERDGLCGLG
Uniprot ID:
Q9Y5B0
Source protein:
RNA polymerase II subunit A C-terminal domain phosphatase
Source gene:
CTDP1
Class:
DEG_APCC_DBOX_1
Location:
537:545
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5648
ASA_SCORE:
83.3
COIL:
0.7683
CONS_SCORE:
0.2346
DSS_SCORE:
0.6068
HELIX:
0.1607
FCONS_SCORE:
1.0189
RIG_SCORE:
0.6695
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P528H
TCGA-25-2397
OV
TCGA
ERDGLCGLG
DEG_APCC_DBOX_1
0.0833
p.P528H
DO28265
OV
ICGC
ERDGLCGLG
DEG_APCC_DBOX_1
0.0833
p.R538L
TCGA-98-8021
LUSC
TCGA
ERDGLCGLG
DEG_APCC_DBOX_1
0.8428
p.R538L
DO27468
LUSC
ICGC
ERDGLCGLG
DEG_APCC_DBOX_1
0.8428
p.R538W
TCGA-A5-A1OF
UCEC
TCGA
ERDGLCGLG
DEG_APCC_DBOX_1
0.8634
p.R538W
TCGA-AX-A2HD
UCEC
TCGA
ERDGLCGLG
DEG_APCC_DBOX_1
0.8634
p.R538W
DO42608
UCEC
ICGC
ERDGLCGLG
DEG_APCC_DBOX_1
0.8634
p.R538W
DO42568
UCEC
ICGC
ERDGLCGLG
DEG_APCC_DBOX_1
0.8634
p.G545S
TCGA-BG-A222
UCEC
TCGA
ERDGLCGLG
DEG_APCC_DBOX_1
0.5882
p.G545S
DO42977
UCEC
ICGC
ERDGLCGLG
DEG_APCC_DBOX_1
0.5882
p.G540A
TCGA-BR-4184
STAD
TCGA
ERDGLCGLG
DEG_APCC_DBOX_1
0.6429
p.G540A
DO38328
STAD
ICGC
ERDGLCGLG
DEG_APCC_DBOX_1
0.6429
p.A549T
TCGA-BR-8361
STAD
TCGA
ERDGLCGLG
DEG_APCC_DBOX_1
0.2222
p.A549T
DO48032
STAD
ICGC
ERDGLCGLG
DEG_APCC_DBOX_1
0.2222
p.A554V
TCGA-EY-A549
UCEC
TCGA
ERDGLCGLG
DEG_APCC_DBOX_1
0.0833
p.A554V
DO48174
UCEC
ICGC
ERDGLCGLG
DEG_APCC_DBOX_1
0.0833
p.E537D
TCGA-OL-A6VQ
BRCA
TCGA
ERDGLCGLG
DEG_APCC_DBOX_1
0.5647
p.E537D
DO51214
BRCA
ICGC
ERDGLCGLG
DEG_APCC_DBOX_1
0.5647
p.D550N
DO225153
BRCA
ICGC
ERDGLCGLG
DEG_APCC_DBOX_1
0.1944
p.D550N
DO234202
ESAD
ICGC
ERDGLCGLG
DEG_APCC_DBOX_1
0.1944
p.D550N
DO228138
PBCA
ICGC
ERDGLCGLG
DEG_APCC_DBOX_1
0.1944
p.G532E
DO233158
GACA
ICGC
ERDGLCGLG
DEG_APCC_DBOX_1
0.1944
p.R538P
DO230961
LUSC
ICGC
ERDGLCGLG
DEG_APCC_DBOX_1
0.7512
p.R538P
DO224594
LUSC
ICGC
ERDGLCGLG
DEG_APCC_DBOX_1
0.7512
p.E534D
SIDM00210
Ovarian Carcinoma
GDSC
ERDGLCGLG
DEG_APCC_DBOX_1
0.25
p.E534D
SIDM00138
Non-Small Cell Lung Carcinoma
GDSC
ERDGLCGLG
DEG_APCC_DBOX_1
0.25
p.R538Q
SIDM00223
Small Cell Lung Carcinoma
GDSC
ERDGLCGLG
DEG_APCC_DBOX_1
0.7329
p.R538Q
ACH-002144
Lung Cancer
CCLE
ERDGLCGLG
DEG_APCC_DBOX_1
0.7329
p.R538Q
IST-SL1
lung
COSMIC
ERDGLCGLG
DEG_APCC_DBOX_1
0.7329
p.G543S
SIDM01664
Prostate Carcinoma
GDSC
ERDGLCGLG
DEG_APCC_DBOX_1
0.5882
p.G543S
ACH-000952
Prostate Cancer
CCLE
ERDGLCGLG
DEG_APCC_DBOX_1
0.5882
Drug responses associated with CTDP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ERDGLCGLG
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y5B0
RNA polymerase II subunit A C-terminal domain phosphatase
DEG_APCC_DBOX_1
537:545
ERDGLCGLG
APC,CDC20,FZR1
0.5648
More...