DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
ERDRLPAVT
Uniprot ID:
Q8WXH0
Source protein:
Nesprin-2
Source gene:
SYNE2
Class:
DEG_APCC_DBOX_1
Location:
4079:4087
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6464
ASA_SCORE:
105.0333
COIL:
0.6584
CONS_SCORE:
0.3658
DSS_SCORE:
0.5941
HELIX:
0.311
FCONS_SCORE:
0.9209
RIG_SCORE:
0.7141
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L4071F
TCGA-CN-6011
HNSC
TCGA
ERDRLPAVT
DEG_APCC_DBOX_1
0.1111
p.Q4069K
TCGA-D3-A2JP
SKCM
TCGA
ERDRLPAVT
DEG_APCC_DBOX_1
0.0556
p.E4095Q
TCGA-DR-A0ZM
CESC
TCGA
ERDRLPAVT
DEG_APCC_DBOX_1
0.1111
p.Q4073R
SIDM00789
Colorectal Carcinoma
GDSC
ERDRLPAVT
DEG_APCC_DBOX_1
0.1667
p.Q4073R
HCT-15
large_intestine
COSMIC
ERDRLPAVT
DEG_APCC_DBOX_1
0.1667
p.G4077V
SIDM00530
Esophageal Carcinoma
GDSC
ERDRLPAVT
DEG_APCC_DBOX_1
0.2778
p.G4077V
SIDM00821
Kidney Carcinoma
GDSC
ERDRLPAVT
DEG_APCC_DBOX_1
0.2778
p.G4077V
KYAE-1
oesophagus
COSMIC
ERDRLPAVT
DEG_APCC_DBOX_1
0.2778
Drug responses associated with SYNE2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ERDRLPAVT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8WXH0
Nesprin-2
DEG_APCC_DBOX_1
4079:4087
ERDRLPAVT
APC,CDC20,FZR1
0.6464
More...