DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
ERGILPGVR
Uniprot ID:
Q96PY6
Source protein:
Serine/threonine-protein kinase Nek1
Source gene:
NEK1
Class:
DEG_APCC_DBOX_1
Location:
476:484
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5176
ASA_SCORE:
88.6222
COIL:
0.8818
CONS_SCORE:
0.2281
DSS_SCORE:
0.4218
HELIX:
0.0474
FCONS_SCORE:
0.7315
RIG_SCORE:
0.6869
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R484H
TCGA-13-0890
OV
TCGA
ERGILPGVR
DEG_APCC_DBOX_1
0.7133
p.R484H
TCGA-TM-A84M
LGG
TCGA
ERGILPGVR
DEG_APCC_DBOX_1
0.7133
p.R484H
DO50238
LGG
ICGC
ERGILPGVR
DEG_APCC_DBOX_1
0.7133
p.R484H
DO28273
OV
ICGC
ERGILPGVR
DEG_APCC_DBOX_1
0.7133
p.L480M
TCGA-B5-A0JY
UCEC
TCGA
ERGILPGVR
DEG_APCC_DBOX_1
0.711
p.L480M
DO43041
UCEC
ICGC
ERGILPGVR
DEG_APCC_DBOX_1
0.711
p.A492T
TCGA-BK-A13B
UCEC
TCGA
ERGILPGVR
DEG_APCC_DBOX_1
0.1111
p.A492T
DO40825
UCEC
ICGC
ERGILPGVR
DEG_APCC_DBOX_1
0.1111
p.G490E
TCGA-P5-A77X
LGG
TCGA
ERGILPGVR
DEG_APCC_DBOX_1
0.1667
p.G490E
DO218769
GACA
ICGC
ERGILPGVR
DEG_APCC_DBOX_1
0.1667
p.G490E
DO223681
LGG
ICGC
ERGILPGVR
DEG_APCC_DBOX_1
0.1667
p.E483K
DO233944
GACA
ICGC
ERGILPGVR
DEG_APCC_DBOX_1
0.7022
p.E483K
DO43987
UCEC
ICGC
ERGILPGVR
DEG_APCC_DBOX_1
0.7022
p.A491D
DO229009
LICA
ICGC
ERGILPGVR
DEG_APCC_DBOX_1
0.1389
p.K472Q
DO41235
UCEC
ICGC
ERGILPGVR
DEG_APCC_DBOX_1
0.2222
p.R484C
SIDM00267
Biliary Tract Carcinoma
GDSC
ERGILPGVR
DEG_APCC_DBOX_1
0.719
p.R484C
ACH-002312
Gallbladder Cancer
CCLE
ERGILPGVR
DEG_APCC_DBOX_1
0.719
p.R484C
TGBC24TKB
biliary_tract
COSMIC
ERGILPGVR
DEG_APCC_DBOX_1
0.719
p.Y470H
ACH-001206
Bone Cancer
CCLE
ERGILPGVR
DEG_APCC_DBOX_1
0.6111
p.R473Q
SNU-175
large_intestine
COSMIC
ERGILPGVR
DEG_APCC_DBOX_1
0.25
Drug responses associated with NEK1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ERGILPGVR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96PY6
Serine/threonine-protein kinase Nek1
DEG_APCC_DBOX_1
476:484
ERGILPGVR
APC,CDC20,FZR1
0.5176
More...