DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
ERKPLLEMN
Uniprot ID:
Q969S9
Source protein:
Ribosome-releasing factor 2, mitochondrial
Source gene:
GFM2
Class:
DEG_APCC_DBOX_1
Location:
257:265
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6398
ASA_SCORE:
87.6889
COIL:
0.4903
CONS_SCORE:
0.4735
DSS_SCORE:
0.4387
HELIX:
0.1846
FCONS_SCORE:
1.2013
RIG_SCORE:
0.7814
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E257D
TCGA-CN-A63Y
HNSC
TCGA
ERKPLLEMN
DEG_APCC_DBOX_1
0.5647
p.E257D
DO44422
HNSC
ICGC
ERKPLLEMN
DEG_APCC_DBOX_1
0.5647
p.M264I
DO1094
BRCA
ICGC
ERKPLLEMN
DEG_APCC_DBOX_1
0.6507
p.K259N
DO229248
THCA
ICGC
ERKPLLEMN
DEG_APCC_DBOX_1
0.5806
p.P267L
SIDM00181
Bladder Carcinoma
GDSC
ERKPLLEMN
DEG_APCC_DBOX_1
0.2778
p.P267L
ACH-002266
Bladder Cancer
CCLE
ERKPLLEMN
DEG_APCC_DBOX_1
0.2778
p.P267L
LB831-BLC
urinary_tract
COSMIC
ERKPLLEMN
DEG_APCC_DBOX_1
0.2778
Drug responses associated with GFM2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ERKPLLEMN
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q969S9
Ribosome-releasing factor 2, mitochondrial
DEG_APCC_DBOX_1
257:265
ERKPLLEMN
APC,CDC20,FZR1
0.6398
More...