DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
ERPDLPPVQ
Uniprot ID:
Q15437
Source protein:
Protein transport protein Sec23B
Source gene:
SEC23B
Class:
DEG_APCC_DBOX_1
Location:
47:55
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5738
ASA_SCORE:
93.9667
COIL:
0.914
CONS_SCORE:
0.4176
DSS_SCORE:
0.1936
HELIX:
0.0262
FCONS_SCORE:
0.6895
RIG_SCORE:
0.7516
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L42F
TCGA-BF-A5EO
SKCM
TCGA
ERPDLPPVQ
DEG_APCC_DBOX_1
0.1944
p.L42F
DO219450
SKCM
ICGC
ERPDLPPVQ
DEG_APCC_DBOX_1
0.1944
p.E47G
TCGA-CC-A7IH
LIHC
TCGA
ERPDLPPVQ
DEG_APCC_DBOX_1
0.6087
p.E47G
DO52181
LIHC
ICGC
ERPDLPPVQ
DEG_APCC_DBOX_1
0.6087
p.P52L
TCGA-D3-A8GO
SKCM
TCGA
ERPDLPPVQ
DEG_APCC_DBOX_1
0.6471
p.P52L
DO51242
SKCM
ICGC
ERPDLPPVQ
DEG_APCC_DBOX_1
0.6471
p.A39V
TCGA-EO-A3KX
UCEC
TCGA
ERPDLPPVQ
DEG_APCC_DBOX_1
0.1111
p.A39V
DO219774
UCEC
ICGC
ERPDLPPVQ
DEG_APCC_DBOX_1
0.1111
p.R48H
DO10172
COAD
ICGC
ERPDLPPVQ
DEG_APCC_DBOX_1
0.8244
p.R48H
SIDM01619
Endometrial Carcinoma
GDSC
ERPDLPPVQ
DEG_APCC_DBOX_1
0.8244
p.R48H
ACH-000984
Endometrial/Uterine Cancer
CCLE
ERPDLPPVQ
DEG_APCC_DBOX_1
0.8244
p.V54L
DO229041
LICA
ICGC
ERPDLPPVQ
DEG_APCC_DBOX_1
0.5654
p.V59L
DO44858
LICA
ICGC
ERPDLPPVQ
DEG_APCC_DBOX_1
0.2222
p.P37L
DO229502
SKCA
ICGC
ERPDLPPVQ
DEG_APCC_DBOX_1
0.0556
p.P64S
SIDM01145
Gastric Carcinoma
GDSC
ERPDLPPVQ
DEG_APCC_DBOX_1
0.0833
p.P64S
ACH-000581
Gastric Cancer
CCLE
ERPDLPPVQ
DEG_APCC_DBOX_1
0.0833
p.P64S
NCI-SNU-16
stomach
COSMIC
ERPDLPPVQ
DEG_APCC_DBOX_1
0.0833
Drug responses associated with SEC23B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ERPDLPPVQ
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q15437
Protein transport protein Sec23B
DEG_APCC_DBOX_1
47:55
ERPDLPPVQ
APC,CDC20,FZR1
0.5738
More...