DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
ERQALQSLR
Uniprot ID:
Q9UQL6
Source protein:
Histone deacetylase 5
Source gene:
HDAC5
Class:
DEG_APCC_DBOX_1
Location:
400:408
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5347
ASA_SCORE:
92.9778
COIL:
0.2397
CONS_SCORE:
0.3546
DSS_SCORE:
0.5306
HELIX:
0.7409
FCONS_SCORE:
1.0193
RIG_SCORE:
0.7697
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E401K
TCGA-69-7974
LUAD
TCGA
ERQALQSLR
DEG_APCC_DBOX_1
0.7022
p.E401K
DO23850
LUAD
ICGC
ERQALQSLR
DEG_APCC_DBOX_1
0.7022
p.S395L
TCGA-BS-A0UV
UCEC
TCGA
ERQALQSLR
DEG_APCC_DBOX_1
0.1944
p.S395L
DO42793
UCEC
ICGC
ERQALQSLR
DEG_APCC_DBOX_1
0.1944
p.G412S
TCGA-IN-A6RO
STAD
TCGA
ERQALQSLR
DEG_APCC_DBOX_1
0.2222
p.G412S
DO51740
STAD
ICGC
ERQALQSLR
DEG_APCC_DBOX_1
0.2222
p.A400V
DO229275
THCA
ICGC
ERQALQSLR
DEG_APCC_DBOX_1
0.6936
p.R409Q
DO229542
UTCA
ICGC
ERQALQSLR
DEG_APCC_DBOX_1
0.3056
p.L408V
SIDM01757
Bladder Carcinoma
GDSC
ERQALQSLR
DEG_APCC_DBOX_1
0.6765
p.L408V
ACH-000741
Bladder Cancer
CCLE
ERQALQSLR
DEG_APCC_DBOX_1
0.6765
Drug responses associated with HDAC5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ERQALQSLR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UQL6
Histone deacetylase 5
DEG_APCC_DBOX_1
400:408
ERQALQSLR
APC,CDC20,FZR1
0.5347
More...