DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
ERSILSRLT
Uniprot ID:
Q8TDI0
Source protein:
Chromodomain-helicase-DNA-binding protein 5
Source gene:
CHD5
Class:
DEG_APCC_DBOX_1
Location:
1896:1904
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5305
ASA_SCORE:
54.3222
COIL:
0.2154
CONS_SCORE:
0.3122
DSS_SCORE:
0.465
HELIX:
0.7707
FCONS_SCORE:
1.0688
RIG_SCORE:
0.7619
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1891Q
TCGA-2W-A8YY
CESC
TCGA
ERSILSRLT
DEG_APCC_DBOX_1
0.1944
p.R1891Q
DO223732
CESC
ICGC
ERSILSRLT
DEG_APCC_DBOX_1
0.1944
p.R1891Q
DO230344
COCA
ICGC
ERSILSRLT
DEG_APCC_DBOX_1
0.1944
p.G1908E
TCGA-90-A4ED
LUSC
TCGA
ERSILSRLT
DEG_APCC_DBOX_1
0.2222
p.G1908E
DO45482
LUSC
ICGC
ERSILSRLT
DEG_APCC_DBOX_1
0.2222
p.G1908R
TCGA-90-A4ED
LUSC
TCGA
ERSILSRLT
DEG_APCC_DBOX_1
0.2222
p.G1908R
DO45482
LUSC
ICGC
ERSILSRLT
DEG_APCC_DBOX_1
0.2222
p.G1908R
ACH-000985
Colon/Colorectal Cancer
CCLE
ERSILSRLT
DEG_APCC_DBOX_1
0.2222
p.S1898I
TCGA-AX-A2HD
UCEC
TCGA
ERSILSRLT
DEG_APCC_DBOX_1
0.623
p.S1898I
DO42608
UCEC
ICGC
ERSILSRLT
DEG_APCC_DBOX_1
0.623
p.P1886S
TCGA-D9-A3Z1
SKCM
TCGA
ERSILSRLT
DEG_APCC_DBOX_1
0.0556
p.P1886S
DO38105
SKCM
ICGC
ERSILSRLT
DEG_APCC_DBOX_1
0.0556
p.L1900M
TCGA-F4-6703
COAD
TCGA
ERSILSRLT
DEG_APCC_DBOX_1
0.711
p.L1900M
DO9908
COAD
ICGC
ERSILSRLT
DEG_APCC_DBOX_1
0.711
p.R1906C
TCGA-FI-A2D0
UCEC
TCGA
ERSILSRLT
DEG_APCC_DBOX_1
0.2778
p.R1906C
TCGA-HC-7211
PRAD
TCGA
ERSILSRLT
DEG_APCC_DBOX_1
0.2778
p.R1906C
DO36287
PRAD
ICGC
ERSILSRLT
DEG_APCC_DBOX_1
0.2778
p.R1906C
DO43891
UCEC
ICGC
ERSILSRLT
DEG_APCC_DBOX_1
0.2778
p.R1902C
TCGA-XK-AAIW
PRAD
TCGA
ERSILSRLT
DEG_APCC_DBOX_1
0.719
p.R1902C
DO51407
PRAD
ICGC
ERSILSRLT
DEG_APCC_DBOX_1
0.719
p.Q1914K
DO224744
COCA
ICGC
ERSILSRLT
DEG_APCC_DBOX_1
0.0556
p.A1890T
DO233921
GACA
ICGC
ERSILSRLT
DEG_APCC_DBOX_1
0.1667
p.L1892P
DO23330
LINC
ICGC
ERSILSRLT
DEG_APCC_DBOX_1
0.2222
p.R1906H
SIDM00683
Prostate Carcinoma
GDSC
ERSILSRLT
DEG_APCC_DBOX_1
0.2778
p.R1906H
LNCaP-Clone-FGC
prostate
COSMIC
ERSILSRLT
DEG_APCC_DBOX_1
0.2778
p.A1907S
SIDM00703
Non-Small Cell Lung Carcinoma
GDSC
ERSILSRLT
DEG_APCC_DBOX_1
0.25
p.A1907S
ACH-000929
Lung Cancer
CCLE
ERSILSRLT
DEG_APCC_DBOX_1
0.25
p.A1907S
NCI-H2110
lung
COSMIC
ERSILSRLT
DEG_APCC_DBOX_1
0.25
p.A1889V
ACH-000935
Colon/Colorectal Cancer
CCLE
ERSILSRLT
DEG_APCC_DBOX_1
0.1389
p.A1889V
MDST8
large_intestine
COSMIC
ERSILSRLT
DEG_APCC_DBOX_1
0.1389
Drug responses associated with CHD5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ERSILSRLT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8TDI0
Chromodomain-helicase-DNA-binding protein 5
DEG_APCC_DBOX_1
1896:1904
ERSILSRLT
APC,CDC20,FZR1
0.5305
More...