DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
ERVLLPQLS
Uniprot ID:
Q5T7N3
Source protein:
KN motif and ankyrin repeat domain-containing protein 4
Source gene:
KANK4
Class:
DEG_APCC_DBOX_1
Location:
470:478
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9814
ASA_SCORE:
96.2556
COIL:
0.7137
CONS_SCORE:
0.3238
DSS_SCORE:
0.5795
HELIX:
0.1604
FCONS_SCORE:
1.2365
RIG_SCORE:
0.7559
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E484K
TCGA-05-4422
LUAD
TCGA
ERVLLPQLS
DEG_APCC_DBOX_1
0.1667
p.E484K
TCGA-19-5956
GBM
TCGA
ERVLLPQLS
DEG_APCC_DBOX_1
0.1667
p.E484K
DO13863
GBM
ICGC
ERVLLPQLS
DEG_APCC_DBOX_1
0.1667
p.E484K
DO25907
LUAD
ICGC
ERVLLPQLS
DEG_APCC_DBOX_1
0.1667
p.Q466E
TCGA-86-8671
LUAD
TCGA
ERVLLPQLS
DEG_APCC_DBOX_1
0.2222
p.Q466E
DO24080
LUAD
ICGC
ERVLLPQLS
DEG_APCC_DBOX_1
0.2222
p.A469T
TCGA-BG-A220
UCEC
TCGA
ERVLLPQLS
DEG_APCC_DBOX_1
0.3056
p.A469T
DO41784
UCEC
ICGC
ERVLLPQLS
DEG_APCC_DBOX_1
0.3056
p.H461Y
TCGA-BR-8687
STAD
TCGA
ERVLLPQLS
DEG_APCC_DBOX_1
0.0833
p.H461Y
DO47801
STAD
ICGC
ERVLLPQLS
DEG_APCC_DBOX_1
0.0833
p.Q466H
TCGA-XF-A8HE
BLCA
TCGA
ERVLLPQLS
DEG_APCC_DBOX_1
0.2222
p.Q466H
DO49797
BLCA
ICGC
ERVLLPQLS
DEG_APCC_DBOX_1
0.2222
p.A469V
DO224768
BRCA
ICGC
ERVLLPQLS
DEG_APCC_DBOX_1
0.3056
p.Q463K
DO229019
LICA
ICGC
ERVLLPQLS
DEG_APCC_DBOX_1
0.1389
p.R471S
DO229045
LICA
ICGC
ERVLLPQLS
DEG_APCC_DBOX_1
0.7427
p.R471C
SIDM00777
Colorectal Carcinoma
GDSC
ERVLLPQLS
DEG_APCC_DBOX_1
0.8301
p.R471C
NCI-H508
large_intestine
COSMIC
ERVLLPQLS
DEG_APCC_DBOX_1
0.8301
p.K462E
SIDM00447
B-Lymphoblastic Leukemia
GDSC
ERVLLPQLS
DEG_APCC_DBOX_1
0.2222
p.K462E
REH
haematopoietic_and_lymphoid_tissue
COSMIC
ERVLLPQLS
DEG_APCC_DBOX_1
0.2222
p.Q481E
SIDM00114
Non-Small Cell Lung Carcinoma
GDSC
ERVLLPQLS
DEG_APCC_DBOX_1
0.25
p.Q481E
H513
pleura
COSMIC
ERVLLPQLS
DEG_APCC_DBOX_1
0.25
p.K462T
SIDM00850
Gastric Carcinoma
GDSC
ERVLLPQLS
DEG_APCC_DBOX_1
0.2222
p.K462T
ACH-000880
Gastric Cancer
CCLE
ERVLLPQLS
DEG_APCC_DBOX_1
0.2222
p.K462T
AGS
stomach
COSMIC
ERVLLPQLS
DEG_APCC_DBOX_1
0.2222
p.Q466R
ACH-000387
Leukemia
CCLE
ERVLLPQLS
DEG_APCC_DBOX_1
0.2222
Drug responses associated with KANK4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ERVLLPQLS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5T7N3
KN motif and ankyrin repeat domain-containing protein 4
DEG_APCC_DBOX_1
470:478
ERVLLPQLS
APC,CDC20,FZR1
0.9814
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