DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
ESDMKVPTV
Uniprot ID:
P82094
Source protein:
TATA element modulatory factor
Source gene:
TMF1
Class:
DEG_COP1_1
Location:
184:192
E3 ligase:
COP1
DEGRON score:
0.7073
ASA_SCORE:
105.7778
COIL:
0.7992
CONS_SCORE:
0.3186
DSS_SCORE:
0.5058
HELIX:
0.134
FCONS_SCORE:
0.9839
RIG_SCORE:
0.7467
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T191A
TCGA-17-Z044
LUAD
TCGA
ESDMKVPTV
DEG_COP1_1
0.7139
p.I201T
TCGA-AJ-A3BG
UCEC
TCGA
ESDMKVPTV
DEG_COP1_1
0.0833
p.I201T
DO42633
UCEC
ICGC
ESDMKVPTV
DEG_COP1_1
0.0833
p.E178K
TCGA-AP-A056
UCEC
TCGA
ESDMKVPTV
DEG_COP1_1
0.1667
p.E178K
DO43971
UCEC
ICGC
ESDMKVPTV
DEG_COP1_1
0.1667
p.E179D
TCGA-B5-A3FC
UCEC
TCGA
ESDMKVPTV
DEG_COP1_1
0.1944
p.E179D
DO41871
UCEC
ICGC
ESDMKVPTV
DEG_COP1_1
0.1944
p.M187V
TCGA-GV-A3QH
BLCA
TCGA
ESDMKVPTV
DEG_COP1_1
0.6097
p.M187V
DO464
BLCA
ICGC
ESDMKVPTV
DEG_COP1_1
0.6097
p.M187V
SIDM00591
Oral Cavity Carcinoma
GDSC
ESDMKVPTV
DEG_COP1_1
0.6097
p.S185L
TCGA-VQ-A8PE
STAD
TCGA
ESDMKVPTV
DEG_COP1_1
0.6556
p.S185L
DO222572
MELA
ICGC
ESDMKVPTV
DEG_COP1_1
0.6556
p.S185L
DO51769
STAD
ICGC
ESDMKVPTV
DEG_COP1_1
0.6556
p.E198K
DO225117
BRCA
ICGC
ESDMKVPTV
DEG_COP1_1
0.1667
p.E198K
DO227878
BRCA
ICGC
ESDMKVPTV
DEG_COP1_1
0.1667
p.V192L
DO228349
MALY
ICGC
ESDMKVPTV
DEG_COP1_1
0.5654
p.V192L
SIDM00656
Burkitt's Lymphoma
GDSC
ESDMKVPTV
DEG_COP1_1
0.5654
p.V192L
SIDM00641
Burkitt's Lymphoma
GDSC
ESDMKVPTV
DEG_COP1_1
0.5654
p.V192L
ACH-000944
Lymphoma
CCLE
ESDMKVPTV
DEG_COP1_1
0.5654
p.V192L
NAMALWA
haematopoietic_and_lymphoid_tissue
COSMIC
ESDMKVPTV
DEG_COP1_1
0.5654
Drug responses associated with TMF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ESDMKVPTV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P82094
TATA element modulatory factor
DEG_COP1_1
184:192
ESDMKVPTV
COP1
0.7073
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