DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
ESSVPEVPDV
Uniprot ID:
A8MW92
Source protein:
PHD finger protein 20-like protein 1
Source gene:
PHF20L1
Class:
DEG_COP1_1
Location:
452:461
E3 ligase:
COP1
DEGRON score:
0.5531
ASA_SCORE:
89.97
COIL:
0.8633
CONS_SCORE:
0.4396
DSS_SCORE:
0.5729
HELIX:
0.1094
FCONS_SCORE:
1.0059
RIG_SCORE:
0.6708
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D460Y
TCGA-D3-A2JP
SKCM
TCGA
ESSVPEVPDV
DEG_COP1_1
0.7325
p.D460Y
DO47407
SKCM
ICGC
ESSVPEVPDV
DEG_COP1_1
0.7325
p.L466V
TCGA-DM-A0XD
COAD
TCGA
ESSVPEVPDV
DEG_COP1_1
0.1944
p.L466V
DO10228
COAD
ICGC
ESSVPEVPDV
DEG_COP1_1
0.1944
p.H463Q
DO225360
BRCA
ICGC
ESSVPEVPDV
DEG_COP1_1
0.2778
p.A462S
DO229045
LICA
ICGC
ESSVPEVPDV
DEG_COP1_1
0.3056
p.E457Q
SIDM00772
Breast Carcinoma
GDSC
ESSVPEVPDV
DEG_COP1_1
0.5633
p.E457Q
SIDM00272
Breast Carcinoma
GDSC
ESSVPEVPDV
DEG_COP1_1
0.5633
p.E457Q
ACH-000755
Breast Cancer
CCLE
ESSVPEVPDV
DEG_COP1_1
0.5633
p.E457Q
HCC2218
breast
COSMIC
ESSVPEVPDV
DEG_COP1_1
0.5633
p.E457Q
MDA-MB-453
breast
COSMIC
ESSVPEVPDV
DEG_COP1_1
0.5633
p.S466F
NCI-H2452
pleura
COSMIC
ESSVPEVPDV
DEG_COP1_1
0.1944
p.T458A
KYSE-220
oesophagus
COSMIC
ESSVPEVPDV
DEG_COP1_1
0.7139
p.S467F
NCI-H2452
pleura
COSMIC
ESSVPEVPDV
DEG_COP1_1
0.1667
p.T459A
KYSE-220
oesophagus
COSMIC
ESSVPEVPDV
DEG_COP1_1
0.7139
Drug responses associated with PHF20L1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ESSVPEVPDV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A8MW92
PHD finger protein 20-like protein 1
DEG_COP1_1
452:461
ESSVPEVPDV
COP1
0.5531
More...