DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
ESTPVSTPVPSP
Uniprot ID:
Q9UBS9
Source protein:
SUN domain-containing ossification factor
Source gene:
SUCO
Class:
DEG_COP1_1
Location:
541:552
E3 ligase:
COP1
DEGRON score:
0.8791
ASA_SCORE:
89.025
COIL:
0.9321
CONS_SCORE:
0.2411
DSS_SCORE:
0.6648
HELIX:
0.0248
FCONS_SCORE:
0.9533
RIG_SCORE:
0.5893
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.H562Y
TCGA-55-8507
LUAD
TCGA
ESTPVSTPVPSP
DEG_COP1_1
0.0556
p.H562Y
ACH-002270
Non-Cancerous
CCLE
ESTPVSTPVPSP
DEG_COP1_1
0.0556
p.H562Y
MC-CAR
haematopoietic_and_lymphoid_tissue
COSMIC
ESTPVSTPVPSP
DEG_COP1_1
0.0556
p.A535T
TCGA-XJ-A9DI
PRAD
TCGA
ESTPVSTPVPSP
DEG_COP1_1
0.1667
p.H558Y
DO222702
MELA
ICGC
ESTPVSTPVPSP
DEG_COP1_1
0.1667
p.R562W
DO232224
PBCA
ICGC
ESTPVSTPVPSP
DEG_COP1_1
0.0556
p.K549T
DO36394
READ
ICGC
ESTPVSTPVPSP
DEG_COP1_1
0.7306
p.G554C
DO47613
SKCM
ICGC
ESTPVSTPVPSP
DEG_COP1_1
0.2778
p.K554N
TE-4
oesophagus
COSMIC
ESTPVSTPVPSP
DEG_COP1_1
0.2778
p.Q542L
RL
haematopoietic_and_lymphoid_tissue
COSMIC
ESTPVSTPVPSP
DEG_COP1_1
0.7765
p.R547C
EN
endometrium
COSMIC
ESTPVSTPVPSP
DEG_COP1_1
0.8301
p.R547H
SNU-1040
large_intestine
COSMIC
ESTPVSTPVPSP
DEG_COP1_1
0.8244
p.A536T
SJRH30
soft_tissue
COSMIC
ESTPVSTPVPSP
DEG_COP1_1
0.1944
Drug responses associated with SUCO mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ESTPVSTPVPSP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UBS9
SUN domain-containing ossification factor
DEG_COP1_1
541:552
ESTPVSTPVPSP
COP1
0.8791
More...