DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
EVSSAPDVPSM
Uniprot ID:
Q8NEZ4
Source protein:
Histone-lysine N-methyltransferase 2C
Source gene:
KMT2C
Class:
DEG_COP1_1
Location:
4114:4124
E3 ligase:
COP1
DEGRON score:
0.6687
ASA_SCORE:
73.8909
COIL:
0.7262
CONS_SCORE:
0.376
DSS_SCORE:
0.3396
HELIX:
0.0292
FCONS_SCORE:
0.9748
RIG_SCORE:
0.6873
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.F4121S
DO223282
UCEC
ICGC
EVSSAPDVPSM
DEG_COP1_1
0.7982
p.E4114K
TCGA-C5-A7CH
CESC
TCGA
EVSSAPDVPSM
DEG_COP1_1
0.7022
p.E4114K
TCGA-GU-AATP
BLCA
TCGA
EVSSAPDVPSM
DEG_COP1_1
0.7022
p.A4122V
DO233652
GACA
ICGC
EVSSAPDVPSM
DEG_COP1_1
0.6936
p.P4116S
DO227549
COCA
ICGC
EVSSAPDVPSM
DEG_COP1_1
0.6752
p.P4119L
TCGA-DD-A73G
LIHC
TCGA
EVSSAPDVPSM
DEG_COP1_1
0.6471
p.V4115G
SW1088
central_nervous_system
COSMIC
EVSSAPDVPSM
DEG_COP1_1
0.6421
p.V4115F
SIDM00645
Non-Small Cell Lung Carcinoma
GDSC
EVSSAPDVPSM
DEG_COP1_1
0.5957
p.V4115F
ACH-000666
Lung Cancer
CCLE
EVSSAPDVPSM
DEG_COP1_1
0.5957
p.V4115F
NCI-H1355
lung
COSMIC
EVSSAPDVPSM
DEG_COP1_1
0.5957
p.P4127S
DO52048
HNSC
ICGC
EVSSAPDVPSM
DEG_COP1_1
0.25
p.G4131V
DO48451
BLCA
ICGC
EVSSAPDVPSM
DEG_COP1_1
0.1389
p.S4107L
DO37931
SKCM
ICGC
EVSSAPDVPSM
DEG_COP1_1
0.1389
p.L4105V
TCGA-D1-A1O5
UCEC
TCGA
EVSSAPDVPSM
DEG_COP1_1
0.0833
p.R4133T
DO222423
MELA
ICGC
EVSSAPDVPSM
DEG_COP1_1
0.0833
p.R4133T
DO37425
SKCM
ICGC
EVSSAPDVPSM
DEG_COP1_1
0.0833
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Drug responses associated with KMT2C mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of EVSSAPDVPSM
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NEZ4
Histone-lysine N-methyltransferase 2C
DEG_COP1_1
4114:4124
EVSSAPDVPSM
COP1
0.6687
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