DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
FDEDTPRK
Uniprot ID:
Q9Y4F5
Source protein:
Centrosomal protein of 170 kDa protein B
Source gene:
CEP170B
Class:
DEG_SCF_SKP2-CKS1_1
Location:
409:416
E3 ligase:
SKP2,CSK1
DEGRON score:
0.963
ASA_SCORE:
109.975
COIL:
0.915
CONS_SCORE:
0.5234
DSS_SCORE:
0.5266
HELIX:
0.0344
FCONS_SCORE:
0.942
RIG_SCORE:
0.7273
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.F408L
TCGA-AJ-A5DW
UCEC
TCGA
FDEDTPRK
DEG_SCF_SKP2-CKS1_1
0.3056
p.R415Q
TCGA-BR-7707
STAD
TCGA
FDEDTPRK
DEG_SCF_SKP2-CKS1_1
0.6218
p.R415Q
TCGA-E6-A1LX
UCEC
TCGA
FDEDTPRK
DEG_SCF_SKP2-CKS1_1
0.6218
p.R415Q
TCGA-EO-A22X
UCEC
TCGA
FDEDTPRK
DEG_SCF_SKP2-CKS1_1
0.6218
p.P426L
TCGA-EI-6882
READ
TCGA
FDEDTPRK
DEG_SCF_SKP2-CKS1_1
0.0556
p.R418C
TCGA-PK-A5HB
ACC
TCGA
FDEDTPRK
DEG_SCF_SKP2-CKS1_1
0.2778
p.F404L
TCGA-PL-A8LY
BRCA
TCGA
FDEDTPRK
DEG_SCF_SKP2-CKS1_1
0.1944
p.F404L
DO51217
BRCA
ICGC
FDEDTPRK
DEG_SCF_SKP2-CKS1_1
0.1944
p.R426H
DO232761
PBCA
ICGC
FDEDTPRK
DEG_SCF_SKP2-CKS1_1
0.0556
p.R416Q
DO38487
STAD
ICGC
FDEDTPRK
DEG_SCF_SKP2-CKS1_1
0.7329
p.R416Q
DO41020
UCEC
ICGC
FDEDTPRK
DEG_SCF_SKP2-CKS1_1
0.7329
p.R416Q
DO43907
UCEC
ICGC
FDEDTPRK
DEG_SCF_SKP2-CKS1_1
0.7329
p.T423M
SIDM02021
Esophageal Carcinoma
GDSC
FDEDTPRK
DEG_SCF_SKP2-CKS1_1
0.5833
Drug responses associated with CEP170B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of FDEDTPRK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y4F5
Centrosomal protein of 170 kDa protein B
DEG_SCF_SKP2-CKS1_1
409:416
FDEDTPRK
SKP2,CSK1
0.963
More...