DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
FDVFPE
Uniprot ID:
Q5FWE3
Source protein:
Proline-rich transmembrane protein 3
Source gene:
PRRT3
Class:
LIG_APCC_ABBA_1
Location:
58:63
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5103
ASA_SCORE:
90.0167
COIL:
0.8517
CONS_SCORE:
0.6719
DSS_SCORE:
0.7096
HELIX:
0.0865
FCONS_SCORE:
1.1696
RIG_SCORE:
0.6849
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A67D
TCGA-A5-A0G1
UCEC
TCGA
FDVFPE
LIG_APCC_ABBA_1
0.2222
p.A67D
DO42472
UCEC
ICGC
FDVFPE
LIG_APCC_ABBA_1
0.2222
p.S50Y
TCGA-EI-6917
READ
TCGA
FDVFPE
LIG_APCC_ABBA_1
0.1111
p.S50Y
DO36881
READ
ICGC
FDVFPE
LIG_APCC_ABBA_1
0.1111
p.S50F
TCGA-F7-8489
HNSC
TCGA
FDVFPE
LIG_APCC_ABBA_1
0.1111
p.S50F
DO14319
HNSC
ICGC
FDVFPE
LIG_APCC_ABBA_1
0.1111
p.P62L
DO227844
COCA
ICGC
FDVFPE
LIG_APCC_ABBA_1
0.6471
p.N72K
DO228974
LICA
ICGC
FDVFPE
LIG_APCC_ABBA_1
0.0833
Drug responses associated with PRRT3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of FDVFPE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5FWE3
Proline-rich transmembrane protein 3
LIG_APCC_ABBA_1
58:63
FDVFPE
APC,CDC20,FZR1
0.5103
More...