DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
FEQQWNAL
Uniprot ID:
Q8IWU2
Source protein:
Serine/threonine-protein kinase LMTK2
Source gene:
LMTK2
Class:
DEG_MDM2_SWIB_1
Location:
422:429
E3 ligase:
MDM2
DEGRON score:
0.8125
ASA_SCORE:
83.7375
COIL:
0.384
CONS_SCORE:
0.5429
DSS_SCORE:
0.5161
HELIX:
0.6024
FCONS_SCORE:
1.1573
RIG_SCORE:
0.7846
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E419D
TCGA-A6-3809
COAD
TCGA
FEQQWNAL
DEG_MDM2_SWIB_1
0.25
p.E419D
DO8722
COAD
ICGC
FEQQWNAL
DEG_MDM2_SWIB_1
0.25
p.E419D
DO229051
LICA
ICGC
FEQQWNAL
DEG_MDM2_SWIB_1
0.25
p.D417N
TCGA-AN-A0FV
BRCA
TCGA
FEQQWNAL
DEG_MDM2_SWIB_1
0.1944
p.D417N
DO5284
BRCA
ICGC
FEQQWNAL
DEG_MDM2_SWIB_1
0.1944
p.D421N
TCGA-B5-A11N
UCEC
TCGA
FEQQWNAL
DEG_MDM2_SWIB_1
0.3056
p.D421N
DO41458
UCEC
ICGC
FEQQWNAL
DEG_MDM2_SWIB_1
0.3056
p.R416W
TCGA-CQ-5332
HNSC
TCGA
FEQQWNAL
DEG_MDM2_SWIB_1
0.1667
p.R416W
DO14518
HNSC
ICGC
FEQQWNAL
DEG_MDM2_SWIB_1
0.1667
p.D417E
TCGA-ER-A19P
SKCM
TCGA
FEQQWNAL
DEG_MDM2_SWIB_1
0.1944
p.D417E
DO47623
SKCM
ICGC
FEQQWNAL
DEG_MDM2_SWIB_1
0.1944
Drug responses associated with LMTK2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of FEQQWNAL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IWU2
Serine/threonine-protein kinase LMTK2
DEG_MDM2_SWIB_1
422:429
FEQQWNAL
MDM2
0.8125
More...