DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
FFLFND
Uniprot ID:
Q9Y4F1
Source protein:
FERM, ARHGEF and pleckstrin domain-containing protein 1
Source gene:
FARP1
Class:
LIG_APCC_ABBA_1
Location:
779:784
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6418
ASA_SCORE:
25.45
COIL:
0.279
CONS_SCORE:
0.5399
DSS_SCORE:
0.0238
HELIX:
0.1972
FCONS_SCORE:
1.3423
RIG_SCORE:
0.9712
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Y788C
TCGA-DI-A1BU
UCEC
TCGA
FFLFND
LIG_APCC_ABBA_1
0.6667
p.Y788C
DO42023
UCEC
ICGC
FFLFND
LIG_APCC_ABBA_1
0.6667
p.R791Q
TCGA-HU-A4GQ
STAD
TCGA
FFLFND
LIG_APCC_ABBA_1
0.1389
p.R791Q
DO47767
STAD
ICGC
FFLFND
LIG_APCC_ABBA_1
0.1389
p.R791Q
ACH-000874
Leukemia
CCLE
FFLFND
LIG_APCC_ABBA_1
0.1389
p.R791Q
RS4-11
haematopoietic_and_lymphoid_tissue
COSMIC
FFLFND
LIG_APCC_ABBA_1
0.1389
p.R791W
TCGA-RQ-A68N
DLBC
TCGA
FFLFND
LIG_APCC_ABBA_1
0.1389
p.R791W
DO219921
DLBC
ICGC
FFLFND
LIG_APCC_ABBA_1
0.1389
p.R782M
DO233888
GACA
ICGC
FFLFND
LIG_APCC_ABBA_1
0.8632
p.R774S
DO228905
LICA
ICGC
FFLFND
LIG_APCC_ABBA_1
0.1944
p.R777L
DO228926
LICA
ICGC
FFLFND
LIG_APCC_ABBA_1
0.2778
p.V788L
DO229018
LICA
ICGC
FFLFND
LIG_APCC_ABBA_1
0.6667
p.R783S
DO229037
LICA
ICGC
FFLFND
LIG_APCC_ABBA_1
0.7427
p.R775H
DO45317
LUAD
ICGC
FFLFND
LIG_APCC_ABBA_1
0.2222
p.R775H
DO228138
PBCA
ICGC
FFLFND
LIG_APCC_ABBA_1
0.2222
p.R777C
DO232224
PBCA
ICGC
FFLFND
LIG_APCC_ABBA_1
0.2778
p.C778Y
DO52404
UCEC
ICGC
FFLFND
LIG_APCC_ABBA_1
0.3056
p.A773V
SIDM00683
Prostate Carcinoma
GDSC
FFLFND
LIG_APCC_ABBA_1
0.1667
p.V785I
ACH-000920
Leukemia
CCLE
FFLFND
LIG_APCC_ABBA_1
0.3056
p.V785I
CML-T1
haematopoietic_and_lymphoid_tissue
COSMIC
FFLFND
LIG_APCC_ABBA_1
0.3056
Drug responses associated with FARP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of FFLFND
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y4F1
FERM, ARHGEF and pleckstrin domain-containing protein 1
LIG_APCC_ABBA_1
779:784
FFLFND
APC,CDC20,FZR1
0.6418
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