DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
FFLFND
Uniprot ID:
Q9Y4F1
Source protein:
FERM, ARHGEF and pleckstrin domain-containing protein 1
Source gene:
FARP1
Class:
LIG_APCC_ABBA_1
Location:
779:784
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6418
ASA_SCORE:
25.45
COIL:
0.279
CONS_SCORE:
0.5399
DSS_SCORE:
0.0238
HELIX:
0.1972
FCONS_SCORE:
1.3423
RIG_SCORE:
0.9712
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R782M
DO233888
GACA
ICGC
FFLFND
LIG_APCC_ABBA_1
0.8632
p.R783S
DO229037
LICA
ICGC
FFLFND
LIG_APCC_ABBA_1
0.7427
p.Y788C
TCGA-DI-A1BU
UCEC
TCGA
FFLFND
LIG_APCC_ABBA_1
0.6667
p.Y788C
DO42023
UCEC
ICGC
FFLFND
LIG_APCC_ABBA_1
0.6667
p.V788L
DO229018
LICA
ICGC
FFLFND
LIG_APCC_ABBA_1
0.6667
p.C778Y
DO52404
UCEC
ICGC
FFLFND
LIG_APCC_ABBA_1
0.3056
p.V785I
ACH-000920
Leukemia
CCLE
FFLFND
LIG_APCC_ABBA_1
0.3056
p.V785I
CML-T1
haematopoietic_and_lymphoid_tissue
COSMIC
FFLFND
LIG_APCC_ABBA_1
0.3056
p.R777L
DO228926
LICA
ICGC
FFLFND
LIG_APCC_ABBA_1
0.2778
p.R777C
DO232224
PBCA
ICGC
FFLFND
LIG_APCC_ABBA_1
0.2778
p.R775H
DO45317
LUAD
ICGC
FFLFND
LIG_APCC_ABBA_1
0.2222
p.R775H
DO228138
PBCA
ICGC
FFLFND
LIG_APCC_ABBA_1
0.2222
p.R774S
DO228905
LICA
ICGC
FFLFND
LIG_APCC_ABBA_1
0.1944
p.A773V
SIDM00683
Prostate Carcinoma
GDSC
FFLFND
LIG_APCC_ABBA_1
0.1667
p.R791Q
TCGA-HU-A4GQ
STAD
TCGA
FFLFND
LIG_APCC_ABBA_1
0.1389
p.R791Q
DO47767
STAD
ICGC
FFLFND
LIG_APCC_ABBA_1
0.1389
p.R791Q
ACH-000874
Leukemia
CCLE
FFLFND
LIG_APCC_ABBA_1
0.1389
p.R791Q
RS4-11
haematopoietic_and_lymphoid_tissue
COSMIC
FFLFND
LIG_APCC_ABBA_1
0.1389
p.R791W
TCGA-RQ-A68N
DLBC
TCGA
FFLFND
LIG_APCC_ABBA_1
0.1389
p.R791W
DO219921
DLBC
ICGC
FFLFND
LIG_APCC_ABBA_1
0.1389
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Drug responses associated with FARP1 mutations
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Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of FFLFND
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y4F1
FERM, ARHGEF and pleckstrin domain-containing protein 1
LIG_APCC_ABBA_1
779:784
FFLFND
APC,CDC20,FZR1
0.6418
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