DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
FFLHGD
Uniprot ID:
Q9UHV7
Source protein:
Mediator of RNA polymerase II transcription subunit 13
Source gene:
MED13
Class:
LIG_APCC_ABBA_1
Location:
166:171
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.571
ASA_SCORE:
39.15
COIL:
0.4328
CONS_SCORE:
0.5749
DSS_SCORE:
0.0659
HELIX:
0.0097
FCONS_SCORE:
1.2646
RIG_SCORE:
0.7924
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S177N
TCGA-BK-A6W3
UCEC
TCGA
FFLHGD
LIG_APCC_ABBA_1
0.1667
p.S177N
DO50076
UCEC
ICGC
FFLHGD
LIG_APCC_ABBA_1
0.1667
p.N181S
TCGA-DD-AAE7
LIHC
TCGA
FFLHGD
LIG_APCC_ABBA_1
0.0556
p.N181S
DO52262
LIHC
ICGC
FFLHGD
LIG_APCC_ABBA_1
0.0556
p.N181S
DO27895
ORCA
ICGC
FFLHGD
LIG_APCC_ABBA_1
0.0556
p.E179K
TCGA-UY-A9PF
BLCA
TCGA
FFLHGD
LIG_APCC_ABBA_1
0.1111
p.E179K
DO219044
BLCA
ICGC
FFLHGD
LIG_APCC_ABBA_1
0.1111
p.N181K
DO229035
LICA
ICGC
FFLHGD
LIG_APCC_ABBA_1
0.0556
p.C162Y
DO229248
THCA
ICGC
FFLHGD
LIG_APCC_ABBA_1
0.2222
p.F166L
SIDM01343
Gastric Carcinoma
GDSC
FFLHGD
LIG_APCC_ABBA_1
0.587
p.F166L
ACH-000764
Gastric Cancer
CCLE
FFLHGD
LIG_APCC_ABBA_1
0.587
Drug responses associated with MED13 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of FFLHGD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UHV7
Mediator of RNA polymerase II transcription subunit 13
LIG_APCC_ABBA_1
166:171
FFLHGD
APC,CDC20,FZR1
0.571
More...