DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
FFTGWWIII
Uniprot ID:
O95807
Source protein:
Transmembrane protein 50A
Source gene:
TMEM50A
Class:
DEG_MDM2_SWIB_1
Location:
32:40
E3 ligase:
MDM2
DEGRON score:
0.5788
ASA_SCORE:
21.9
COIL:
0.1196
CONS_SCORE:
0.7378
DSS_SCORE:
0.0011
HELIX:
0.8152
FCONS_SCORE:
1.4197
RIG_SCORE:
1.0761
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.I23V
TCGA-77-8148
LUSC
TCGA
FFTGWWIII
DEG_MDM2_SWIB_1
0.0833
p.I23V
DO26458
LUSC
ICGC
FFTGWWIII
DEG_MDM2_SWIB_1
0.0833
p.A42T
TCGA-CM-4743
COAD
TCGA
FFTGWWIII
DEG_MDM2_SWIB_1
0.2778
p.A42T
DO8103
COAD
ICGC
FFTGWWIII
DEG_MDM2_SWIB_1
0.2778
p.A28T
TCGA-EY-A5W2
UCEC
TCGA
FFTGWWIII
DEG_MDM2_SWIB_1
0.2222
p.A28T
DO48177
UCEC
ICGC
FFTGWWIII
DEG_MDM2_SWIB_1
0.2222
p.T48P
TCGA-FU-A3HZ
CESC
TCGA
FFTGWWIII
DEG_MDM2_SWIB_1
0.1111
p.T48P
DO6308
CESC
ICGC
FFTGWWIII
DEG_MDM2_SWIB_1
0.1111
p.A24S
DO229025
LICA
ICGC
FFTGWWIII
DEG_MDM2_SWIB_1
0.1111
p.F32L
SIDM00193
Colorectal Carcinoma
GDSC
FFTGWWIII
DEG_MDM2_SWIB_1
0.6981
p.F32L
ACH-000991
Colon/Colorectal Cancer
CCLE
FFTGWWIII
DEG_MDM2_SWIB_1
0.6981
p.F32L
SNU-81
large_intestine
COSMIC
FFTGWWIII
DEG_MDM2_SWIB_1
0.6981
Drug responses associated with TMEM50A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of FFTGWWIII
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95807
Transmembrane protein 50A
DEG_MDM2_SWIB_1
32:40
FFTGWWIII
MDM2
0.5788
More...