DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
FGIFVD
Uniprot ID:
Q8N5C6
Source protein:
S1 RNA-binding domain-containing protein 1
Source gene:
SRBD1
Class:
LIG_APCC_ABBA_1
Location:
932:937
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5946
ASA_SCORE:
16.8333
COIL:
0.1717
CONS_SCORE:
0.832
DSS_SCORE:
0.0363
HELIX:
0.0085
FCONS_SCORE:
1.3223
RIG_SCORE:
0.9692
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A929V
TCGA-AX-A2IN
UCEC
TCGA
FGIFVD
LIG_APCC_ABBA_1
0.25
p.S943C
TCGA-VS-A953
CESC
TCGA
FGIFVD
LIG_APCC_ABBA_1
0.1667
p.G933V
TCGA-Z2-AA3V
SKCM
TCGA
FGIFVD
LIG_APCC_ABBA_1
0.6421
p.G933V
ACH-001061
Colon/Colorectal Cancer
CCLE
FGIFVD
LIG_APCC_ABBA_1
0.6421
p.P947A
SIDM01157
Other Solid Cancers
GDSC
FGIFVD
LIG_APCC_ABBA_1
0.0556
p.P947A
ACH-001400
Cervical Cancer
CCLE
FGIFVD
LIG_APCC_ABBA_1
0.0556
p.P947A
SW954
vulva
COSMIC
FGIFVD
LIG_APCC_ABBA_1
0.0556
Drug responses associated with SRBD1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of FGIFVD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8N5C6
S1 RNA-binding domain-containing protein 1
LIG_APCC_ABBA_1
932:937
FGIFVD
APC,CDC20,FZR1
0.5946
More...