DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
FGQGWMKL
Uniprot ID:
Q13972
Source protein:
Ras-specific guanine nucleotide-releasing factor 1
Source gene:
RASGRF1
Class:
DEG_MDM2_SWIB_1
Location:
1063:1070
E3 ligase:
MDM2
DEGRON score:
0.6142
ASA_SCORE:
69.1875
COIL:
0.778
CONS_SCORE:
0.5305
DSS_SCORE:
0.1628
HELIX:
0.1561
FCONS_SCORE:
1.2162
RIG_SCORE:
0.8433
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E1060Q
TCGA-4Z-AA7W
BLCA
TCGA
FGQGWMKL
DEG_MDM2_SWIB_1
0.25
p.P1077T
TCGA-A5-A0VP
UCEC
TCGA
FGQGWMKL
DEG_MDM2_SWIB_1
0.1389
p.E1074K
TCGA-AC-A23H
BRCA
TCGA
FGQGWMKL
DEG_MDM2_SWIB_1
0.2222
p.F1062L
TCGA-B5-A1MR
UCEC
TCGA
FGQGWMKL
DEG_MDM2_SWIB_1
0.3056
p.E1058K
DO2401
BRCA
ICGC
FGQGWMKL
DEG_MDM2_SWIB_1
0.1944
p.V1053I
SIDM00328
Esophageal Squamous Cell Carcinoma
GDSC
FGQGWMKL
DEG_MDM2_SWIB_1
0.0556
p.V1053I
TE-6
oesophagus
COSMIC
FGQGWMKL
DEG_MDM2_SWIB_1
0.0556
p.Y1059H
SIDM01194
Hepatocellular Carcinoma
GDSC
FGQGWMKL
DEG_MDM2_SWIB_1
0.2222
p.Y1059H
SNU-449
liver
COSMIC
FGQGWMKL
DEG_MDM2_SWIB_1
0.2222
p.K1055R
SIDM00519
Mesothelioma
GDSC
FGQGWMKL
DEG_MDM2_SWIB_1
0.2222
p.K1055R
H2869
pleura
COSMIC
FGQGWMKL
DEG_MDM2_SWIB_1
0.2222
Drug responses associated with RASGRF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of FGQGWMKL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13972
Ras-specific guanine nucleotide-releasing factor 1
DEG_MDM2_SWIB_1
1063:1070
FGQGWMKL
MDM2
0.6142
More...