DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
FGVYGD
Uniprot ID:
P26599
Source protein:
Polypyrimidine tract-binding protein 1
Source gene:
PTBP1
Class:
LIG_APCC_ABBA_1
Location:
358:363
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.858
ASA_SCORE:
51.9333
COIL:
0.6135
CONS_SCORE:
0.648
DSS_SCORE:
0.0164
HELIX:
0.0808
FCONS_SCORE:
1.2504
RIG_SCORE:
0.9038
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G350C
TCGA-43-2581
LUSC
TCGA
FGVYGD
LIG_APCC_ABBA_1
0.1111
p.G350C
DO26602
LUSC
ICGC
FGVYGD
LIG_APCC_ABBA_1
0.1111
p.E373K
TCGA-AC-A5XS
BRCA
TCGA
FGVYGD
LIG_APCC_ABBA_1
0.1667
p.P372Q
TCGA-D3-A2JL
SKCM
TCGA
FGVYGD
LIG_APCC_ABBA_1
0.0833
p.L370R
TCGA-D9-A6EC
SKCM
TCGA
FGVYGD
LIG_APCC_ABBA_1
0.1389
p.P355S
TCGA-EY-A215
UCEC
TCGA
FGVYGD
LIG_APCC_ABBA_1
0.25
p.P355S
DO42665
UCEC
ICGC
FGVYGD
LIG_APCC_ABBA_1
0.25
p.A360T
TCGA-XE-A8H5
TGCT
TCGA
FGVYGD
LIG_APCC_ABBA_1
0.7139
p.E366K
DO50023
BRCA
ICGC
FGVYGD
LIG_APCC_ABBA_1
0.25
p.R366L
DO8938
COAD
ICGC
FGVYGD
LIG_APCC_ABBA_1
0.25
p.L358F
DO228948
LICA
ICGC
FGVYGD
LIG_APCC_ABBA_1
0.6981
p.V360L
DO220851
MELA
ICGC
FGVYGD
LIG_APCC_ABBA_1
0.5654
p.Q352H
DO46657
PAAD
ICGC
FGVYGD
LIG_APCC_ABBA_1
0.1667
p.P365Q
DO47278
SKCM
ICGC
FGVYGD
LIG_APCC_ABBA_1
0.2778
p.L363R
DO50291
SKCM
ICGC
FGVYGD
LIG_APCC_ABBA_1
0.8428
p.L354F
DO50288
SKCM
ICGC
FGVYGD
LIG_APCC_ABBA_1
0.2222
p.R351W
SIDM02055
Colorectal Carcinoma
GDSC
FGVYGD
LIG_APCC_ABBA_1
0.1389
p.P355L
SIDM01007
T-Lymphoblastic Leukemia
GDSC
FGVYGD
LIG_APCC_ABBA_1
0.25
p.N369S
SIDM00537
Colorectal Carcinoma
GDSC
FGVYGD
LIG_APCC_ABBA_1
0.1667
p.N369S
GP5d
large_intestine
COSMIC
FGVYGD
LIG_APCC_ABBA_1
0.1667
p.I369V
ACH-000978
Endometrial/Uterine Cancer
CCLE
FGVYGD
LIG_APCC_ABBA_1
0.1667
p.I369V
EN
endometrium
COSMIC
FGVYGD
LIG_APCC_ABBA_1
0.1667
p.L357I
ACH-000986
Colon/Colorectal Cancer
CCLE
FGVYGD
LIG_APCC_ABBA_1
0.3056
p.L357I
HT-115
large_intestine
COSMIC
FGVYGD
LIG_APCC_ABBA_1
0.3056
p.Q365H
ACH-002272
Lymphoma
CCLE
FGVYGD
LIG_APCC_ABBA_1
0.2778
p.I365V
EN
endometrium
COSMIC
FGVYGD
LIG_APCC_ABBA_1
0.2778
p.L353I
HT-115
large_intestine
COSMIC
FGVYGD
LIG_APCC_ABBA_1
0.1944
p.N362S
GP5d
large_intestine
COSMIC
FGVYGD
LIG_APCC_ABBA_1
0.7069
Drug responses associated with PTBP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of FGVYGD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P26599
Polypyrimidine tract-binding protein 1
LIG_APCC_ABBA_1
358:363
FGVYGD
APC,CDC20,FZR1
0.858
More...