DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
FHVFLE
Uniprot ID:
Q9Y5X3
Source protein:
Sorting nexin-5
Source gene:
SNX5
Class:
LIG_APCC_ABBA_1
Location:
162:167
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5985
ASA_SCORE:
27.55
COIL:
0.137
CONS_SCORE:
0.6212
DSS_SCORE:
0.1235
HELIX:
0.09
FCONS_SCORE:
1.2498
RIG_SCORE:
0.8812
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q170H
TCGA-D3-A2JP
SKCM
TCGA
FHVFLE
LIG_APCC_ABBA_1
0.25
p.Q170H
DO47407
SKCM
ICGC
FHVFLE
LIG_APCC_ABBA_1
0.25
p.P154S
TCGA-FR-A7U9
SKCM
TCGA
FHVFLE
LIG_APCC_ABBA_1
0.1111
p.P154S
DO48546
SKCM
ICGC
FHVFLE
LIG_APCC_ABBA_1
0.1111
p.R176W
DO227849
COCA
ICGC
FHVFLE
LIG_APCC_ABBA_1
0.0833
p.N161D
DO233272
GACA
ICGC
FHVFLE
LIG_APCC_ABBA_1
0.3056
p.H163R
ACH-001610
Brain Cancer
CCLE
FHVFLE
LIG_APCC_ABBA_1
0.7133
Drug responses associated with SNX5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of FHVFLE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y5X3
Sorting nexin-5
LIG_APCC_ABBA_1
162:167
FHVFLE
APC,CDC20,FZR1
0.5985
More...