DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
FKIFRE
Uniprot ID:
Q7Z494
Source protein:
Nephrocystin-3
Source gene:
NPHP3
Class:
LIG_APCC_ABBA_1
Location:
172:177
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6237
ASA_SCORE:
98.4833
COIL:
0.4992
CONS_SCORE:
0.4746
DSS_SCORE:
0.3301
HELIX:
0.4687
FCONS_SCORE:
1.091
RIG_SCORE:
0.8268
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K173N
TCGA-67-4679
LUAD
TCGA
FKIFRE
LIG_APCC_ABBA_1
0.5806
p.K173N
DO23604
LUAD
ICGC
FKIFRE
LIG_APCC_ABBA_1
0.5806
p.K167T
DO228650
LICA
ICGC
FKIFRE
LIG_APCC_ABBA_1
0.3056
p.K167T
SIDM01219
Non-Small Cell Lung Carcinoma
GDSC
FKIFRE
LIG_APCC_ABBA_1
0.3056
p.K167T
LU-99A
lung
COSMIC
FKIFRE
LIG_APCC_ABBA_1
0.3056
p.Q184H
DO46538
OV
ICGC
FKIFRE
LIG_APCC_ABBA_1
0.1389
p.D166H
SIDM00952
B-Cell Non-Hodgkin's Lymphoma
GDSC
FKIFRE
LIG_APCC_ABBA_1
0.1667
p.D166H
ACH-002220
Lymphoma
CCLE
FKIFRE
LIG_APCC_ABBA_1
0.1667
p.D166H
CRO-AP2
haematopoietic_and_lymphoid_tissue
COSMIC
FKIFRE
LIG_APCC_ABBA_1
0.1667
Drug responses associated with NPHP3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of FKIFRE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q7Z494
Nephrocystin-3
LIG_APCC_ABBA_1
172:177
FKIFRE
APC,CDC20,FZR1
0.6237
More...