DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
FKVHLE
Uniprot ID:
P52948
Source protein:
Nuclear pore complex protein Nup98-Nup96
Source gene:
NUP98
Class:
LIG_APCC_ABBA_1
Location:
1194:1199
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9654
ASA_SCORE:
55.15
COIL:
0.1332
CONS_SCORE:
0.2591
DSS_SCORE:
0.3362
HELIX:
0.0163
FCONS_SCORE:
0.9904
RIG_SCORE:
0.8072
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.M1195I
TCGA-43-2581
LUSC
TCGA
FKVHLE
LIG_APCC_ABBA_1
0.7618
p.M1195I
DO26602
LUSC
ICGC
FKVHLE
LIG_APCC_ABBA_1
0.7618
p.S1185I
TCGA-D3-A2J6
SKCM
TCGA
FKVHLE
LIG_APCC_ABBA_1
0.0833
p.S1185I
DO37901
SKCM
ICGC
FKVHLE
LIG_APCC_ABBA_1
0.0833
p.P1191S
TCGA-EO-A22R
UCEC
TCGA
FKVHLE
LIG_APCC_ABBA_1
0.25
p.P1191S
DO42713
UCEC
ICGC
FKVHLE
LIG_APCC_ABBA_1
0.25
p.L1206F
TCGA-LG-A6GG
LIHC
TCGA
FKVHLE
LIG_APCC_ABBA_1
0.1389
p.L1206F
DO49699
LIHC
ICGC
FKVHLE
LIG_APCC_ABBA_1
0.1389
p.P1201T
DO229036
LICA
ICGC
FKVHLE
LIG_APCC_ABBA_1
0.2778
p.P1188R
NCI-H196
lung
COSMIC
FKVHLE
LIG_APCC_ABBA_1
0.1667
Drug responses associated with NUP98 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of FKVHLE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P52948
Nuclear pore complex protein Nup98-Nup96
LIG_APCC_ABBA_1
1194:1199
FKVHLE
APC,CDC20,FZR1
0.9654
More...