DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
FKVYFD
Uniprot ID:
Q96RP9
Source protein:
Elongation factor G, mitochondrial
Source gene:
GFM1
Class:
LIG_APCC_ABBA_1
Location:
480:485
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9527
ASA_SCORE:
55.8833
COIL:
0.2123
CONS_SCORE:
0.6207
DSS_SCORE:
0.3425
HELIX:
0.0143
FCONS_SCORE:
0.8617
RIG_SCORE:
0.8673
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E476Q
TCGA-BT-A20J
BLCA
TCGA
FKVYFD
LIG_APCC_ABBA_1
0.2222
p.E476Q
DO457
BLCA
ICGC
FKVYFD
LIG_APCC_ABBA_1
0.2222
p.I493L
DO231992
LICA
ICGC
FKVYFD
LIG_APCC_ABBA_1
0.1111
p.M474L
SIDM00450
Acute Myeloid Leukemia
GDSC
FKVYFD
LIG_APCC_ABBA_1
0.1667
p.M474L
PL-21
haematopoietic_and_lymphoid_tissue
COSMIC
FKVYFD
LIG_APCC_ABBA_1
0.1667
p.L482M
SIDM00087
Plasma Cell Myeloma
GDSC
FKVYFD
LIG_APCC_ABBA_1
0.711
p.L482M
RPMI-8226
haematopoietic_and_lymphoid_tissue
COSMIC
FKVYFD
LIG_APCC_ABBA_1
0.711
p.N478H
SIDM00346
Chronic Myelogenous Leukemia
GDSC
FKVYFD
LIG_APCC_ABBA_1
0.2778
p.N478H
LAMA-84
haematopoietic_and_lymphoid_tissue
COSMIC
FKVYFD
LIG_APCC_ABBA_1
0.2778
p.D481Y
SIDM01105
Melanoma
GDSC
FKVYFD
LIG_APCC_ABBA_1
0.7325
p.D481Y
SK-MEL-3
skin
COSMIC
FKVYFD
LIG_APCC_ABBA_1
0.7325
Drug responses associated with GFM1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of FKVYFD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96RP9
Elongation factor G, mitochondrial
LIG_APCC_ABBA_1
480:485
FKVYFD
APC,CDC20,FZR1
0.9527
More...