DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
FLIHYE
Uniprot ID:
Q96PZ7
Source protein:
CUB and sushi domain-containing protein 1
Source gene:
CSMD1
Class:
LIG_APCC_ABBA_1
Location:
859:864
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8826
ASA_SCORE:
84.5833
COIL:
0.5865
CONS_SCORE:
0.5657
DSS_SCORE:
0.1398
HELIX:
0.0207
FCONS_SCORE:
1.3146
RIG_SCORE:
0.8748
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T867K
TCGA-61-2018
OV
TCGA
FLIHYE
LIG_APCC_ABBA_1
0.25
p.T867K
DO29218
OV
ICGC
FLIHYE
LIG_APCC_ABBA_1
0.25
p.R854C
TCGA-AX-A06F
UCEC
TCGA
FLIHYE
LIG_APCC_ABBA_1
0.1944
p.R854C
TCGA-Y8-A894
KIRP
TCGA
FLIHYE
LIG_APCC_ABBA_1
0.1944
p.R854C
DO233078
GACA
ICGC
FLIHYE
LIG_APCC_ABBA_1
0.1944
p.R854C
DO49798
KIRP
ICGC
FLIHYE
LIG_APCC_ABBA_1
0.1944
p.R854C
DO41752
UCEC
ICGC
FLIHYE
LIG_APCC_ABBA_1
0.1944
p.D851G
TCGA-F5-6814
READ
TCGA
FLIHYE
LIG_APCC_ABBA_1
0.1111
p.D851G
DO36556
READ
ICGC
FLIHYE
LIG_APCC_ABBA_1
0.1111
p.S872F
TCGA-FR-A726
SKCM
TCGA
FLIHYE
LIG_APCC_ABBA_1
0.1111
p.S872F
DO222536
MELA
ICGC
FLIHYE
LIG_APCC_ABBA_1
0.1111
p.S872F
DO48665
SKCM
ICGC
FLIHYE
LIG_APCC_ABBA_1
0.1111
p.T867A
DO222737
COCA
ICGC
FLIHYE
LIG_APCC_ABBA_1
0.25
p.T867M
DO233160
GACA
ICGC
FLIHYE
LIG_APCC_ABBA_1
0.25
p.S856G
DO233791
GACA
ICGC
FLIHYE
LIG_APCC_ABBA_1
0.25
p.S853R
DO229035
LICA
ICGC
FLIHYE
LIG_APCC_ABBA_1
0.1667
p.S856R
DO229009
LICA
ICGC
FLIHYE
LIG_APCC_ABBA_1
0.25
p.R854H
DO23132
LINC
ICGC
FLIHYE
LIG_APCC_ABBA_1
0.1944
p.D851V
DO220864
MELA
ICGC
FLIHYE
LIG_APCC_ABBA_1
0.1111
p.D851V
FU-OV-1
ovary
COSMIC
FLIHYE
LIG_APCC_ABBA_1
0.1111
p.S870L
DO46513
OV
ICGC
FLIHYE
LIG_APCC_ABBA_1
0.1667
p.D851E
SIDM00791
Chronic Myelogenous Leukemia
GDSC
FLIHYE
LIG_APCC_ABBA_1
0.1111
p.D851E
K-562
haematopoietic_and_lymphoid_tissue
COSMIC
FLIHYE
LIG_APCC_ABBA_1
0.1111
p.V866L
SIDM00280
Gastric Carcinoma
GDSC
FLIHYE
LIG_APCC_ABBA_1
0.2778
p.V866L
ECC10
stomach
COSMIC
FLIHYE
LIG_APCC_ABBA_1
0.2778
p.G858C
SIDM00312
Plasma Cell Myeloma
GDSC
FLIHYE
LIG_APCC_ABBA_1
0.3056
p.G858C
L-363
haematopoietic_and_lymphoid_tissue
COSMIC
FLIHYE
LIG_APCC_ABBA_1
0.3056
p.S865N
SIDM00150
Colorectal Carcinoma
GDSC
FLIHYE
LIG_APCC_ABBA_1
0.3056
p.S865N
KM12
large_intestine
COSMIC
FLIHYE
LIG_APCC_ABBA_1
0.3056
p.G859C
ACH-000183
Myeloma
CCLE
FLIHYE
LIG_APCC_ABBA_1
0.76
p.G859C
L-363
haematopoietic_and_lymphoid_tissue
COSMIC
FLIHYE
LIG_APCC_ABBA_1
0.76
p.V867L
ACH-000560
Gastric Cancer
CCLE
FLIHYE
LIG_APCC_ABBA_1
0.25
p.V867L
ECC10
stomach
COSMIC
FLIHYE
LIG_APCC_ABBA_1
0.25
p.D852E
ACH-002061
Leukemia
CCLE
FLIHYE
LIG_APCC_ABBA_1
0.1389
p.D852E
K-562
haematopoietic_and_lymphoid_tissue
COSMIC
FLIHYE
LIG_APCC_ABBA_1
0.1389
p.G863W
NCI-H2110
lung
COSMIC
FLIHYE
LIG_APCC_ABBA_1
0.7825
p.S866N
KM12
large_intestine
COSMIC
FLIHYE
LIG_APCC_ABBA_1
0.2778
Drug responses associated with CSMD1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of FLIHYE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96PZ7
CUB and sushi domain-containing protein 1
LIG_APCC_ABBA_1
859:864
FLIHYE
APC,CDC20,FZR1
0.8826
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