DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
FNEDWDSEL
Uniprot ID:
Q9NQ92
Source protein:
Coordinator of PRMT5 and differentiation stimulator
Source gene:
COPRS
Class:
DEG_MDM2_SWIB_1
Location:
112:120
E3 ligase:
MDM2
DEGRON score:
0.9128
ASA_SCORE:
72.0222
COIL:
0.4576
CONS_SCORE:
0.9298
DSS_SCORE:
0.6776
HELIX:
0.4823
FCONS_SCORE:
1.0623
RIG_SCORE:
0.7592
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.F112Y
TCGA-AA-3977
COAD
TCGA
FNEDWDSEL
DEG_MDM2_SWIB_1
0.7528
p.F112Y
DO8730
COAD
ICGC
FNEDWDSEL
DEG_MDM2_SWIB_1
0.7528
p.D110Y
TCGA-D6-A6EQ
HNSC
TCGA
FNEDWDSEL
DEG_MDM2_SWIB_1
0.2778
p.D110Y
DO52085
HNSC
ICGC
FNEDWDSEL
DEG_MDM2_SWIB_1
0.2778
p.E114D
TCGA-DF-A2KU
UCEC
TCGA
FNEDWDSEL
DEG_MDM2_SWIB_1
0.5647
p.E114D
DO223286
UCEC
ICGC
FNEDWDSEL
DEG_MDM2_SWIB_1
0.5647
p.F112V
TCGA-FA-A4BB
DLBC
TCGA
FNEDWDSEL
DEG_MDM2_SWIB_1
0.7068
p.F112V
DO219885
DLBC
ICGC
FNEDWDSEL
DEG_MDM2_SWIB_1
0.7068
p.D115E
DO229027
LICA
ICGC
FNEDWDSEL
DEG_MDM2_SWIB_1
0.5647
p.D110N
DO52670
MALY
ICGC
FNEDWDSEL
DEG_MDM2_SWIB_1
0.2778
p.P127S
DO220891
MELA
ICGC
FNEDWDSEL
DEG_MDM2_SWIB_1
0.1389
p.G125R
SIDM00516
Melanoma
GDSC
FNEDWDSEL
DEG_MDM2_SWIB_1
0.1944
p.G125R
ACH-002166
Skin Cancer
CCLE
FNEDWDSEL
DEG_MDM2_SWIB_1
0.1944
p.G125R
MZ7-mel
skin
COSMIC
FNEDWDSEL
DEG_MDM2_SWIB_1
0.1944
p.L111F
ACH-001367
Neuroblastoma
CCLE
FNEDWDSEL
DEG_MDM2_SWIB_1
0.3056
p.L129F
CAL-85-1
breast
COSMIC
FNEDWDSEL
DEG_MDM2_SWIB_1
0.0833
p.G113R
MZ7-mel
skin
COSMIC
FNEDWDSEL
DEG_MDM2_SWIB_1
0.7568
Drug responses associated with COPRS mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of FNEDWDSEL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NQ92
Coordinator of PRMT5 and differentiation stimulator
DEG_MDM2_SWIB_1
112:120
FNEDWDSEL
MDM2
0.9128
More...