DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
FNPFSE
Uniprot ID:
O15127
Source protein:
Secretory carrier-associated membrane protein 2
Source gene:
SCAMP2
Class:
LIG_APCC_ABBA_1
Location:
37:42
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.993
ASA_SCORE:
55.7667
COIL:
0.7012
CONS_SCORE:
0.3975
DSS_SCORE:
0.5649
HELIX:
0.2225
FCONS_SCORE:
1.4927
RIG_SCORE:
0.7274
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A29T
TCGA-55-8512
LUAD
TCGA
FNPFSE
LIG_APCC_ABBA_1
0.1111
p.A29T
DO23635
LUAD
ICGC
FNPFSE
LIG_APCC_ABBA_1
0.1111
p.A29D
TCGA-AB-2827
LAML
TCGA
FNPFSE
LIG_APCC_ABBA_1
0.1111
p.A29D
DO22032
LAML
ICGC
FNPFSE
LIG_APCC_ABBA_1
0.1111
p.P39S
TCGA-D3-A8GJ
SKCM
TCGA
FNPFSE
LIG_APCC_ABBA_1
0.6752
p.P39S
DO50285
SKCM
ICGC
FNPFSE
LIG_APCC_ABBA_1
0.6752
p.F40L
DO233726
GACA
ICGC
FNPFSE
LIG_APCC_ABBA_1
0.6981
p.A46E
DO229006
LICA
ICGC
FNPFSE
LIG_APCC_ABBA_1
0.2222
p.A45V
DO51129
PRAD
ICGC
FNPFSE
LIG_APCC_ABBA_1
0.25
p.A46V
SIDM00458
Acute Myeloid Leukemia
GDSC
FNPFSE
LIG_APCC_ABBA_1
0.2222
p.A46V
SIDM00999
Bladder Carcinoma
GDSC
FNPFSE
LIG_APCC_ABBA_1
0.2222
p.A46V
SIDM01413
Oral Cavity Carcinoma
GDSC
FNPFSE
LIG_APCC_ABBA_1
0.2222
p.A46V
OCI-M1
haematopoietic_and_lymphoid_tissue
COSMIC
FNPFSE
LIG_APCC_ABBA_1
0.2222
p.A46V
639-V
urinary_tract
COSMIC
FNPFSE
LIG_APCC_ABBA_1
0.2222
Drug responses associated with SCAMP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of FNPFSE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15127
Secretory carrier-associated membrane protein 2
LIG_APCC_ABBA_1
37:42
FNPFSE
APC,CDC20,FZR1
0.993
More...