DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
FNPYYD
Uniprot ID:
P05060
Source protein:
Secretogranin-1
Source gene:
CHGB
Class:
LIG_APCC_ABBA_1
Location:
522:527
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9579
ASA_SCORE:
94.7667
COIL:
0.8515
CONS_SCORE:
0.6776
DSS_SCORE:
0.3257
HELIX:
0.1235
FCONS_SCORE:
1.0096
RIG_SCORE:
0.7746
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E537K
TCGA-AX-A2H2
UCEC
TCGA
FNPYYD
LIG_APCC_ABBA_1
0.0556
p.E537K
TCGA-D3-A3CB
SKCM
TCGA
FNPYYD
LIG_APCC_ABBA_1
0.0556
p.E537K
TCGA-YD-A9TA
SKCM
TCGA
FNPYYD
LIG_APCC_ABBA_1
0.0556
p.E537K
DO47386
SKCM
ICGC
FNPYYD
LIG_APCC_ABBA_1
0.0556
p.E537K
DO219503
SKCM
ICGC
FNPYYD
LIG_APCC_ABBA_1
0.0556
p.E537K
DO41959
UCEC
ICGC
FNPYYD
LIG_APCC_ABBA_1
0.0556
p.Q530K
TCGA-DA-A1I1
SKCM
TCGA
FNPYYD
LIG_APCC_ABBA_1
0.25
p.Q530K
DO37966
SKCM
ICGC
FNPYYD
LIG_APCC_ABBA_1
0.25
p.S533I
TCGA-EO-A3B0
UCEC
TCGA
FNPYYD
LIG_APCC_ABBA_1
0.1667
p.S533I
DO219773
UCEC
ICGC
FNPYYD
LIG_APCC_ABBA_1
0.1667
p.L529V
TCGA-IG-A3Y9
ESCA
TCGA
FNPYYD
LIG_APCC_ABBA_1
0.2778
p.P524S
TCGA-IH-A3EA
SKCM
TCGA
FNPYYD
LIG_APCC_ABBA_1
0.6752
p.P524S
DO37667
SKCM
ICGC
FNPYYD
LIG_APCC_ABBA_1
0.6752
p.A512D
DO234257
ESAD
ICGC
FNPYYD
LIG_APCC_ABBA_1
0.0556
Drug responses associated with CHGB mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of FNPYYD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P05060
Secretogranin-1
LIG_APCC_ABBA_1
522:527
FNPYYD
APC,CDC20,FZR1
0.9579
More...