DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
FPAAAVLPT
Uniprot ID:
Q86XT2
Source protein:
Vacuolar protein sorting-associated protein 37D
Source gene:
VPS37D
Class:
DEG_SIAH_1
Location:
193:201
E3 ligase:
SIAH1,SIAH2,SIAH3
DEGRON score:
0.9777
ASA_SCORE:
64.1111
COIL:
0.8883
CONS_SCORE:
0.5331
DSS_SCORE:
0.6194
HELIX:
0.039
FCONS_SCORE:
1.1053
RIG_SCORE:
0.6565
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P211S
TCGA-D5-6535
COAD
TCGA
FPAAAVLPT
DEG_SIAH_1
0.0556
p.P211S
DO10397
COAD
ICGC
FPAAAVLPT
DEG_SIAH_1
0.0556
p.R205Q
TCGA-F4-6856
COAD
TCGA
FPAAAVLPT
DEG_SIAH_1
0.2222
p.R205Q
DO9114
COAD
ICGC
FPAAAVLPT
DEG_SIAH_1
0.2222
p.V198A
TCGA-F7-A624
HNSC
TCGA
FPAAAVLPT
DEG_SIAH_1
0.6936
p.V198A
DO44440
HNSC
ICGC
FPAAAVLPT
DEG_SIAH_1
0.6936
p.A209V
TCGA-RC-A6M4
LIHC
TCGA
FPAAAVLPT
DEG_SIAH_1
0.1111
p.A209V
DO223915
LIHC
ICGC
FPAAAVLPT
DEG_SIAH_1
0.1111
p.T184I
TCGA-T2-A6X2
HNSC
TCGA
FPAAAVLPT
DEG_SIAH_1
0.0833
p.T184I
DO219071
HNSC
ICGC
FPAAAVLPT
DEG_SIAH_1
0.0833
p.L199M
DO229259
THCA
ICGC
FPAAAVLPT
DEG_SIAH_1
0.5999
p.P208T
DO229234
THCA
ICGC
FPAAAVLPT
DEG_SIAH_1
0.1389
p.R205L
SIDM02039
Colorectal Carcinoma
GDSC
FPAAAVLPT
DEG_SIAH_1
0.2222
p.F193L
SIDM00814
Other Solid Cancers
GDSC
FPAAAVLPT
DEG_SIAH_1
0.587
p.F193L
ACH-001401
Adrenal Cancer
CCLE
FPAAAVLPT
DEG_SIAH_1
0.587
p.F193L
SW13
adrenal_gland
COSMIC
FPAAAVLPT
DEG_SIAH_1
0.587
Drug responses associated with VPS37D mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of FPAAAVLPT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q86XT2
Vacuolar protein sorting-associated protein 37D
DEG_SIAH_1
193:201
FPAAAVLPT
SIAH1,SIAH2,SIAH3
0.9777
More...