DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
FREPLQSLQ
Uniprot ID:
Q5VST9
Source protein:
Obscurin
Source gene:
OBSCN
Class:
DEG_APCC_DBOX_1
Location:
3892:3900
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7634
ASA_SCORE:
85.7556
COIL:
0.5394
CONS_SCORE:
0.5159
DSS_SCORE:
0.5117
HELIX:
0.0117
FCONS_SCORE:
0.9391
RIG_SCORE:
0.7665
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A3890V
TCGA-18-3409
LUSC
TCGA
FREPLQSLQ
DEG_APCC_DBOX_1
0.2778
p.A3890V
DO26444
LUSC
ICGC
FREPLQSLQ
DEG_APCC_DBOX_1
0.2778
p.A3906T
TCGA-55-A48X
LUAD
TCGA
FREPLQSLQ
DEG_APCC_DBOX_1
0.1667
p.A3906T
DO24048
LUAD
ICGC
FREPLQSLQ
DEG_APCC_DBOX_1
0.1667
p.A3906S
TCGA-91-6836
LUAD
TCGA
FREPLQSLQ
DEG_APCC_DBOX_1
0.1667
p.A3906S
DO23854
LUAD
ICGC
FREPLQSLQ
DEG_APCC_DBOX_1
0.1667
p.G3893E
TCGA-EE-A29S
SKCM
TCGA
FREPLQSLQ
DEG_APCC_DBOX_1
0.7199
p.G3893E
DO37936
SKCM
ICGC
FREPLQSLQ
DEG_APCC_DBOX_1
0.7199
p.E3892K
TCGA-EE-A3AG
SKCM
TCGA
FREPLQSLQ
DEG_APCC_DBOX_1
0.7022
p.E3892K
DO37471
SKCM
ICGC
FREPLQSLQ
DEG_APCC_DBOX_1
0.7022
p.W3910C
TCGA-WA-A7H4
HNSC
TCGA
FREPLQSLQ
DEG_APCC_DBOX_1
0.0556
p.W3910C
DO219097
HNSC
ICGC
FREPLQSLQ
DEG_APCC_DBOX_1
0.0556
p.P3907A
TCGA-XF-A8HF
BLCA
TCGA
FREPLQSLQ
DEG_APCC_DBOX_1
0.1389
p.P3907A
DO49800
BLCA
ICGC
FREPLQSLQ
DEG_APCC_DBOX_1
0.1389
p.C3900F
DO228952
LICA
ICGC
FREPLQSLQ
DEG_APCC_DBOX_1
0.7108
p.E3888K
DO220872
MELA
ICGC
FREPLQSLQ
DEG_APCC_DBOX_1
0.2222
p.A3890S
SIDM00216
Colorectal Carcinoma
GDSC
FREPLQSLQ
DEG_APCC_DBOX_1
0.2778
p.A3890S
ACH-000989
Colon/Colorectal Cancer
CCLE
FREPLQSLQ
DEG_APCC_DBOX_1
0.2778
p.A3890S
SNU-175
large_intestine
COSMIC
FREPLQSLQ
DEG_APCC_DBOX_1
0.2778
p.Q3897H
ACH-000927
Breast Cancer
CCLE
FREPLQSLQ
DEG_APCC_DBOX_1
0.647
p.Q3897H
BT-474
breast
COSMIC
FREPLQSLQ
DEG_APCC_DBOX_1
0.647
p.R3893W
SNU-1040
large_intestine
COSMIC
FREPLQSLQ
DEG_APCC_DBOX_1
0.8634
p.R3893W
HuH-7
liver
COSMIC
FREPLQSLQ
DEG_APCC_DBOX_1
0.8634
p.A3901V
SNU-1040
large_intestine
COSMIC
FREPLQSLQ
DEG_APCC_DBOX_1
0.3056
p.V3885I
NCI-H2110
lung
COSMIC
FREPLQSLQ
DEG_APCC_DBOX_1
0.1389
Drug responses associated with OBSCN mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of FREPLQSLQ
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5VST9
Obscurin
DEG_APCC_DBOX_1
3892:3900
FREPLQSLQ
APC,CDC20,FZR1
0.7634
More...