DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
FRGCLRKLA
Uniprot ID:
P25391
Source protein:
Laminin subunit alpha-1
Source gene:
LAMA1
Class:
DEG_APCC_DBOX_1
Location:
3036:3044
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7184
ASA_SCORE:
34.2444
COIL:
0.1802
CONS_SCORE:
0.3944
DSS_SCORE:
0.1224
HELIX:
0.0239
FCONS_SCORE:
1.4069
RIG_SCORE:
0.886
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S3048G
TCGA-24-2267
OV
TCGA
FRGCLRKLA
DEG_APCC_DBOX_1
0.6667
p.S3048G
DO29740
OV
ICGC
FRGCLRKLA
DEG_APCC_DBOX_1
0.6667
p.R3037C
TCGA-BK-A13B
UCEC
TCGA
FRGCLRKLA
DEG_APCC_DBOX_1
0.8301
p.R3037C
TCGA-BS-A0UV
UCEC
TCGA
FRGCLRKLA
DEG_APCC_DBOX_1
0.8301
p.R3037C
DO234384
ESAD
ICGC
FRGCLRKLA
DEG_APCC_DBOX_1
0.8301
p.R3037C
DO220866
MELA
ICGC
FRGCLRKLA
DEG_APCC_DBOX_1
0.8301
p.R3037C
DO40825
UCEC
ICGC
FRGCLRKLA
DEG_APCC_DBOX_1
0.8301
p.R3037C
DO42793
UCEC
ICGC
FRGCLRKLA
DEG_APCC_DBOX_1
0.8301
p.R3037H
TCGA-CM-4743
COAD
TCGA
FRGCLRKLA
DEG_APCC_DBOX_1
0.8244
p.R3037H
DO8103
COAD
ICGC
FRGCLRKLA
DEG_APCC_DBOX_1
0.8244
p.R3037H
SIDM00792
Small Cell Lung Carcinoma
GDSC
FRGCLRKLA
DEG_APCC_DBOX_1
0.8244
p.R3037H
NCI-H1688
lung
COSMIC
FRGCLRKLA
DEG_APCC_DBOX_1
0.8244
p.R3041M
TCGA-D3-A2JK
SKCM
TCGA
FRGCLRKLA
DEG_APCC_DBOX_1
0.7521
p.R3041M
DO37619
SKCM
ICGC
FRGCLRKLA
DEG_APCC_DBOX_1
0.7521
p.S3035L
TCGA-EE-A2MJ
SKCM
TCGA
FRGCLRKLA
DEG_APCC_DBOX_1
0.3056
p.S3035L
DO233903
GACA
ICGC
FRGCLRKLA
DEG_APCC_DBOX_1
0.3056
p.S3035L
DO38099
SKCM
ICGC
FRGCLRKLA
DEG_APCC_DBOX_1
0.3056
p.R3031H
TCGA-EW-A1OZ
BRCA
TCGA
FRGCLRKLA
DEG_APCC_DBOX_1
0.1944
p.R3031H
DO3834
BRCA
ICGC
FRGCLRKLA
DEG_APCC_DBOX_1
0.1944
p.R3031H
SIDM00673
Breast Carcinoma
GDSC
FRGCLRKLA
DEG_APCC_DBOX_1
0.1944
p.R3031H
ACH-000668
Breast Cancer
CCLE
FRGCLRKLA
DEG_APCC_DBOX_1
0.1944
p.R3031H
HCC70
breast
COSMIC
FRGCLRKLA
DEG_APCC_DBOX_1
0.1944
p.V3051A
TCGA-IN-7806
STAD
TCGA
FRGCLRKLA
DEG_APCC_DBOX_1
0.1389
p.V3051A
DO38831
STAD
ICGC
FRGCLRKLA
DEG_APCC_DBOX_1
0.1389
p.S3053F
DO220899
MELA
ICGC
FRGCLRKLA
DEG_APCC_DBOX_1
0.5278
p.Q3033L
SIDM00771
Non-Small Cell Lung Carcinoma
GDSC
FRGCLRKLA
DEG_APCC_DBOX_1
0.25
p.Q3033L
ACH-000496
Lung Cancer
CCLE
FRGCLRKLA
DEG_APCC_DBOX_1
0.25
p.Q3033L
NCI-H1792
lung
COSMIC
FRGCLRKLA
DEG_APCC_DBOX_1
0.25
p.S3032R
SIDM00251
Gastric Carcinoma
GDSC
FRGCLRKLA
DEG_APCC_DBOX_1
0.2222
p.S3032R
ACH-000949
Gastric Cancer
CCLE
FRGCLRKLA
DEG_APCC_DBOX_1
0.2222
p.S3032R
TGBC11TKB
stomach
COSMIC
FRGCLRKLA
DEG_APCC_DBOX_1
0.2222
p.Q3027K
ACH-000097
Breast Cancer
CCLE
FRGCLRKLA
DEG_APCC_DBOX_1
0.0833
p.P3049L
ACH-000588
Myeloma
CCLE
FRGCLRKLA
DEG_APCC_DBOX_1
0.1944
Drug responses associated with LAMA1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of FRGCLRKLA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P25391
Laminin subunit alpha-1
DEG_APCC_DBOX_1
3036:3044
FRGCLRKLA
APC,CDC20,FZR1
0.7184
More...